Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi752g00007 ATGTGTGTGCAGGACGCTGATCAAGATGCCCAAGATATGAACAACATGGACAATACAAAAAAGTTATGGCCTTTGCATGGTGAGCTTTTGCTTACCCAGAAAGAGAATTTGGAAAAGGAATCTTCTTTGAGAACTTCAAGTGGCGAAAGGATCAGTATTGAAAATTCATTTCCTGACCTGGAAAGCATAGGTGAGGATGCAGTGGTTGCAGACAAGAAACAGAACCTGATGAATTATGTCCCTGATCTACGGTCGGGAGAGTGGTCCGATATTGGAGAACACCCTTACATGGAGGATACTCACATATGCATTGGAGATTTGGCAAAAAAGTTTAATTGTAACATACACTCTGAGGAGGCTGTTTCCTTTTATGGGGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTCCGTGATCATCTGCCAAGAATTATCGTTGAGGATGTTAACTTTCCTTTGGAACTAGAGAAGGTGGTCAAAAGGTCATTTTTGGAGACTGATAAAGCATTTGCAAAGACATCCTCTTGTGAATGTTCCCTTTCTTCTCGTACAACTTCGCTAACTGCATTTATATTTGGAAGGTCTCTACTTGTAGCCAATGCTGGAGATTGCCGAGCTGTCTTGTCCCGTCATGGAAGGGTTATAGACATGTCCAAAGATCATAGGCCAAACTGCACCAAAGAGAGGATGCGGATT 702 0.4245 MCVQDADQDAQDMNNMDNTKKLWPLHGELLLTQKENLEKESSLRTSSGERISIENSFPDLESIGEDAVVADKKQNLMNYVPDLRSGEWSDIGEHPYMEDTHICIGDLAKKFNCNIHSEEAVSFYGVFDGHGGKSAAQFVRDHLPRIIVEDVNFPLELEKVVKRSFLETDKAFAKTSSCECSLSSRTTSLTAFIFGRSLLVANAGDCRAVLSRHGRVIDMSKDHRPNCTKERMRI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi752g00007 234 ProSiteProfiles PPM-type phosphatase domain profile. 84 234 IPR001932 -
Gabi752g00007 234 PANTHER PROTEIN PHOSPHATASE 2C 61 234 IPR015655 GO:0004722|GO:0006470
Gabi752g00007 234 Pfam Protein phosphatase 2C 97 234 IPR001932 -
Gabi752g00007 234 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Gabi752g00007 234 Gene3D - 76 234 IPR036457 -
Gabi752g00007 234 CDD PP2Cc 84 234 IPR001932 -
Gabi752g00007 234 SUPERFAMILY PP2C-like 76 234 IPR036457 -
Gabi752g00007 234 SMART PP2C_4 74 234 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi752g00007 Gabi-Chr752 181651 183833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi752g00007 34 234 PP2C-type Phosphatase Gene Family AT2G25620 49.010 1.01e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Gabi752g00007 PP2C 2.6e-29 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi752g00007 K14803 - gmx:100813157 317.775