Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi745g00006 ATGTGGAGTACAGCCAGTGTTCGTGTAGAAGATGAGAAGGGAACAGCAGGAGGGATGCCAGGCTTCGATTCACAATTACCAAATTCCAATGCATGCTATACAGAGGGAAGCACAATTGATTCTTTTCGTGTGTCTGACTTTGATCAATCAATTGGATATCGCTTAGAGGATGCTGTTGACTTGAGTGGAAACTCGGTTTTTAACTCGCTAAAATTAAGTAGCCAAACAACTTCTCCTGGTCTTGTCCACGTTGGTACTTGTAATAAGTTGCCAACTTCACTTGATAAAAGCCCATTGATGAACCAAACAGAACGACGGAGCTTGCAATTACAAAAGGTTCAATCATCAAATTTAGTCACAATATTAAGTGGTAACACAGAAAACCTGGAAGAGTCTGCCATGGCTGATGCCAGTCCTAGAACTGATATTTCTACAGATGGTGACACCGATGATAAGAATCAGAGGTTCGATAGAAGTCAATCCCTTGCTGCTGCTGCTTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGGTTGAGAAAGAAAGCTTATGTCCAACAATTGGAAAGTAGTCGTTTGAAGTTGACCCAACTGGAGCAAGAACTTCAGCGGGCTAGGCAGCAGGGAATCTTTATATCAAACTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATACGCAAGGTGGCTGGAAGAGCAGAGTCGACAAGTAAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAACTTCGCATGATTATTGATGGTATAATGGTACATTATGATGAGATATTTAGGCTGAAGGGCATTGCAGCCAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCGGCTGAGAGGTGTTTCCTATGGCTTGGTGGTTTTCGATCATCCGAACTCCTCAAGCTCCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGCTAGTGGGTATTACCAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTTCTGAGACATTGTCCACTGGATCTGGATCACTTGGCTCCTCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCTATGGGTAAGCTTGGGACACTTGAGGGGTTTATTCGGCAGGCTGACAATTTGCGCCAGCAGACTCTGCAACAAATTCACCGTATATTGACAACTCGCCAATCGGCTCGTGCACTCCTTGCGATACATGACTACTTTTCAAGGCTGCGCGCTCTTAGCTCCCTTTGGCTTGCACGCCCAAGAGATTGA 1404 0.453 MWSTASVRVEDEKGTAGGMPGFDSQLPNSNACYTEGSTIDSFRVSDFDQSIGYRLEDAVDLSGNSVFNSLKLSSQTTSPGLVHVGTCNKLPTSLDKSPLMNQTERRSLQLQKVQSSNLVTILSGNTENLEESAMADASPRTDISTDGDTDDKNQRFDRSQSLAAAASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNSGDQAHSMSGNGAMAFDVEYARWLEEQSRQVNELRAAVNSHASDTELRMIIDGIMVHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi745g00006 467 Pfam Basic region leucine zipper 176 222 IPR004827 GO:0003700|GO:0006355
Gabi745g00006 467 PANTHER TRANSCRIPTION FACTOR TGA9 118 466 - -
Gabi745g00006 467 MobiDBLite consensus disorder prediction 1 27 - -
Gabi745g00006 467 Gene3D - 179 231 - -
Gabi745g00006 467 ProSiteProfiles DOG1 domain profile. 245 464 IPR025422 GO:0006351|GO:0043565
Gabi745g00006 467 MobiDBLite consensus disorder prediction 129 182 - -
Gabi745g00006 467 CDD bZIP_HBP1b-like 180 231 - -
Gabi745g00006 467 Coils Coil 199 226 - -
Gabi745g00006 467 Coils Coil 256 276 - -
Gabi745g00006 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 222 IPR004827 GO:0003700|GO:0006355
Gabi745g00006 467 FunFam BZIP family transcription factor 179 228 - -
Gabi745g00006 467 SUPERFAMILY Leucine zipper domain 180 223 IPR046347 GO:0003700|GO:0006355
Gabi745g00006 467 MobiDBLite consensus disorder prediction 143 157 - -
Gabi745g00006 467 SMART brlzneu 176 239 IPR004827 GO:0003700|GO:0006355
Gabi745g00006 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Gabi745g00006 467 Pfam Seed dormancy control 262 338 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi745g00006 Gabi-Chr745 111560 122842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi745g00006 134 467 bZIP Transcription Factor Family AT3G12250 79.042 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi745g00006 DOG1 8.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi745g00006 K14431 - gmx:100816123 700.279