Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi739g00023 ATGTCGACCTATAATCAATCCCACTATTACTATTTCCTTCTCTTAAAGCTTCTCAGTGCACTCGTTGTTATCTTTGGCCTCGGAATCATCATATTCTTTATCGTGGTTCAACCTCACTCTTTCAAGTTCTATGTGACTGAAGCCGAGCTAACCCAATTCGACTACACCAACAACACCCTACACTACAACTTGGTTCTCAACTTCACCGTTCGCAACCCAAACGAAAAACTCAGCATATACTATGACAAAGTGGAGGCATTGGCATTCTACGAGGGATCAAGGTTCGCCAGTCCTGACGTCATCACGGACATGAACTCCTTCGGTCAGTGCAAGAAGAGCACAGACACCATCAGCGCCGTTTTCGCAGGCCAGCAAATGCTTCTTCTCGACAATGATCAGGTCTCTGATTTCAACAAAGACAAGAGTGTTGGGATTTATAACATTTATGTGAAGCTCTATTTCAGGATTAGGTTCAGGGTCGGGGACTTCATTACCCGAACCATGAAGCCAAAGGTCAAATGTGACCTCAAGGTTCCCTTCATAAATTCTAATACAACCCTCACTCTCTTTGAGACCACCAACTGTGATGTTCATTTCTAG 600 0.44 MSTYNQSHYYYFLLLKLLSALVVIFGLGIIIFFIVVQPHSFKFYVTEAELTQFDYTNNTLHYNLVLNFTVRNPNEKLSIYYDKVEALAFYEGSRFASPDVITDMNSFGQCKKSTDTISAVFAGQQMLLLDNDQVSDFNKDKSVGIYNIYVKLYFRIRFRVGDFITRTMKPKVKCDLKVPFINSNTTLTLFETTNCDVHF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi739g00023 199 Pfam Late embryogenesis abundant protein 68 174 IPR004864 -
Gabi739g00023 199 PANTHER OS05G0367900 PROTEIN 18 179 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi739g00023 Gabi-Chr739 165410 166009 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi739g00023 35 186 SNARE and Associated Proteins AT1G32270 37.419 2.38e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi739g00023 - - gmx:100795302 258.84