Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi737g00001 ATGAAGAGAGTAAGGGATGAGGCTCCTCCAAAGAAAACGGTTGAATTTGAAGAAGCTATTAGTTTTGTGAACAAGATAAAGAAACGATTCCAAAGTGATGAGCATGTTTACAAATCGTTCTTGAACATTTCCAATATGTACCGCAAAGAGCATAAGGACATAGGTGAAATTTATAGTGAGGTTGCTACCCTGTTTAAGGATCATCGAGATTTGCTTGAGGAGTTCACTAGATTCTTACCAGATAGTTTCGCAGCACCTTCTACACAGCATGCTCCGGATGCTCGAAATTCATTGCAGCGCTTTAGTGAGCGGAGTTCTATGGCACCCATGATGCGGCAAATGCAAGTATATCGACGAAAGAGGCTTCCTTCTCATGATCGTGAGCGTGATCTGAGTGTTGAACACCCTGAGATGGATGATGACAACACAATGATGAACATGCACAAGAAGCGGAGGAAACGTGAGAGTAAGGATATGAGGATTAATCGTGATCAGGATGAGAGAGAACCTGATCATAATAACAGCAGGGATTTGAACTTGCAGCGCTTTCATGAGAAAAAGAAATCTGTCAAGAAAGCTGAAGGTTTTGGGTTGGCTTCAGACTTTTCTTCTAAGGAAGACAAGGATACCTTAAAGAACATGTATAGTCAAGCATTCAGTTTCTTTGAGAAAGTTAAGGAGAAGTTGAACAGTGCTGATGACTACCAAGCTTTCTTGAAGTGCCTTCATAATTTTTTCGTCAGTGAAATAATAAAAAGGAATGAATTGCAAAATTTGGTAACCGATTTACTTGGAAAGCATCTTGATCTTATGGTGGAATTCAATGATTTCCTGGAGTGTTTGGAAAATATTGATGGGTTCCTTGCTGGTGTCATGAGTAAAAAGTCACTAAGATCATCAAAGTTGGAGGACAAAGACAAAGACAAAGAGCAGAAGCGTGAGATGGATGGAGCTAAAGAGAAGGAAAGATACAGGGAGAAGGAGTACATGGGAAAATCCATTCAAGAACTTGACCTCAGTGACTGTAAACGTTGCACTCCCAGCTACCGGCTTCTACCTGCTGATTATCCAATTCCTACAGCTAGTCAGAGATCTGAGCTTGGTGCTCAAGTATTGAATGATCACTGGGTATCTGTGAGTTCAGGAAGTGAGGATTACTCTTCCGAACATATGTGCAGGAATCAGTACGAAGAGAGCTTGTTCAGATGTGAAGATGACAGATTTGAGCTGGACATGTTATTAGAGTCTGTGAGTTCTGCAGCTAAACGTGCAGAGGAATTATATAATAACATGAATGAAAATAAGATCAATATGGAGACTCTGAACCGTATTGAAGATTACTTTACTGTTCAAAATTTAAGGTGCATTGAACGTCTATATGGTGACCATGGTCTTGACGTTATAGACATATTGCGTAAAAACCCAACTCGTGCGCTCCCTGTAATATTGACTCGACTGAAGCAGAAACAGGAGGAATGGAGTCGGTGTCGTTCAGATTTCAATAAAGTTTGGGCTGAAATTTATTCTAAAAATAGACTCAGCTGGTTCCTGGTGAGGATCGGGCAAGGAAAGTATGGATCTGTTTCGTTGTGTAGGTCTCTTGTTGGCGGCGCGGAGTATGCGTGTAAGACTCTGAAGAAGGGGGATGAGACTGTTTACAGGGAGGTGGAGATAATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTCTGCTGGCAGTGTATGAGGAAGCTGATTGCTCTCATCTGGTGATGGAATTGTGCTCTGGGGGAAGACTTGTCGACCAGATGTTTAGGGAGGGCCCTTGTTCTGAACAGCGGGCTGCTAATATACTTAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAGCCTGAGAATATTCTGCTTACTGCTTCGGGGGAAATAAAGCTTGCTGATTTTGGCCTGGCCATGAGAATTTCTAAGGGTCAGAACTTGACGGGTTTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGAGTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGTAAGTTTATGGTAGATTATTAA 2295 0.4235 MKRVRDEAPPKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLNISNMYRKEHKDIGEIYSEVATLFKDHRDLLEEFTRFLPDSFAAPSTQHAPDARNSLQRFSERSSMAPMMRQMQVYRRKRLPSHDRERDLSVEHPEMDDDNTMMNMHKKRRKRESKDMRINRDQDEREPDHNNSRDLNLQRFHEKKKSVKKAEGFGLASDFSSKEDKDTLKNMYSQAFSFFEKVKEKLNSADDYQAFLKCLHNFFVSEIIKRNELQNLVTDLLGKHLDLMVEFNDFLECLENIDGFLAGVMSKKSLRSSKLEDKDKDKEQKREMDGAKEKERYREKEYMGKSIQELDLSDCKRCTPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVSSGSEDYSSEHMCRNQYEESLFRCEDDRFELDMLLESVSSAAKRAEELYNNMNENKINMETLNRIEDYFTVQNLRCIERLYGDHGLDVIDILRKNPTRALPVILTRLKQKQEEWSRCRSDFNKVWAEIYSKNRLSWFLVRIGQGKYGSVSLCRSLVGGAEYACKTLKKGDETVYREVEIMQHLSGHPGVVTLLAVYEEADCSHLVMELCSGGRLVDQMFREGPCSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGEIKLADFGLAMRISKGQNLTGLAGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLEFQTGMWESISKPARDLVGRMLTRDISARITADEVLSKFMVDY 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi737g00001 764 Gene3D Paired amphipathic helix 209 282 IPR036600 GO:0006355
Gabi737g00001 764 SMART serkin_6 515 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi737g00001 764 PANTHER SIN3B-RELATED 9 515 IPR039774 GO:0003714
Gabi737g00001 764 FunFam Maternal embryonic leucine zipper kinase 511 764 - -
Gabi737g00001 764 SUPERFAMILY Protein kinase-like (PK-like) 519 758 IPR011009 -
Gabi737g00001 764 CDD STKc_CAMK 520 758 - -
Gabi737g00001 764 ProSiteProfiles PAH domain profile. 211 281 IPR003822 GO:0006355
Gabi737g00001 764 MobiDBLite consensus disorder prediction 83 184 - -
Gabi737g00001 764 Pfam Paired amphipathic helix repeat 35 79 IPR003822 GO:0006355
Gabi737g00001 764 Pfam Paired amphipathic helix repeat 233 278 IPR003822 GO:0006355
Gabi737g00001 764 FunFam Paired amphipathic helix SIN3-like protein 11 82 - -
Gabi737g00001 764 FunFam Paired amphipathic helix protein SIN3 208 283 - -
Gabi737g00001 764 Pfam Protein kinase domain 519 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi737g00001 764 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Gabi737g00001 764 SMART hdac_interact2seq4b 341 441 IPR013194 -
Gabi737g00001 764 SUPERFAMILY PAH2 domain 9 81 IPR036600 GO:0006355
Gabi737g00001 764 MobiDBLite consensus disorder prediction 299 324 - -
Gabi737g00001 764 ProSiteProfiles PAH domain profile. 12 82 IPR003822 GO:0006355
Gabi737g00001 764 Gene3D Paired amphipathic helix 11 82 IPR036600 GO:0006355
Gabi737g00001 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Gabi737g00001 764 MobiDBLite consensus disorder prediction 119 148 - -
Gabi737g00001 764 ProSiteProfiles Protein kinase domain profile. 514 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi737g00001 764 Coils Coil 414 444 - -
Gabi737g00001 764 Pfam Sin3 family co-repressor 343 435 IPR013194 -
Gabi737g00001 764 SUPERFAMILY PAH2 domain 212 279 IPR036600 GO:0006355
Gabi737g00001 764 MobiDBLite consensus disorder prediction 157 184 - -
Gabi737g00001 764 Gene3D Transferase(Phosphotransferase) domain 1 515 763 - -
Gabi737g00001 764 MobiDBLite consensus disorder prediction 89 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi737g00001 Gabi-Chr737 3634 8279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi737g00001 506 757 EF-hand Containing Proteins AT4G35310 42.748 3.58e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi737g00001 Pkinase 1.1e-63 CL0016
TR Others Gabi737g00001 Pkinase 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi737g00001 K11644 - gmx:100807181 801.971