Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi736g00005 ATGGCTTCTTCTCTGCTACCCCTTTTGCTATGCTCACTGATTCTACTACCCTTTTGTGTTCTAGCCCAAACCAGAAGCCAGATAAACGTTGGGGATTCTCTTAAAGCAGAATCTAGCAACTCCACATGGGTAGTTTCACCTTCTGGTGACTTTGCCTTTGGCTTTCTACCACTCACAGACACTGATCTTTTCATTCTTTGCATTTGGTATGCAAAGATTCCAGACAAAACCATAATCTGGTATGCTAACACAGATAATCCTACACCAAAGGACTCAAAAGTTGAGCTTAATGCTAATGATGGGTTAGTGCTTACTGCTCCTGATGGTAACCAGTTATGGAAGACACAAGGCCTTAGTGTTGGGGTTGCTAATGGTGTCATCAATGACACTGGCAACTTTGTTCTTCGGGATGGTAACTCCAACAGTGTGTATGAGACTTTCAAGGATCGTAGAGACACCTTGTTGCCCTCTCAGATTCTTGAAAAGGGTGGAAAGCTTTCTTCTAGACTTATGGAGACAAATTTCAGTAAAGGAAGGTTTGAGCTTGTTTTTCAAAATGATGGTAATCTTGTGATGCATTCTATAAATTTACCATCTGGATATGCTAATGAAAACTATTATGAAAGCAAAACTGTTGAGTCCAATACATCAAGTCCTGGAACTCAATTGGTCTTTGATAGTTTTGGGAACATATATATTTTGAGAAAGAACAATGAAAAATACAATTTTTCAGAAGTGAGTGGAGTCTCTACCACTCAATTTTATCTTAGAGCAACTCTTAATTTTGATGGGGTGTTCACACTCTATCAACATCCAAAGAGTTCCTCCGGGAATCAAGGTTGGACCTCAATATGGTCTCAACCAGATAATATCTGTAGTTACAATGTTAATTCAGGTAGTGGAGTTTGTGGATACAATAGCTTTTGTACCTTGGGAGATGATAAGAGACCAACATGTCAGTGCCCAAAAAGGTACTCACTACTTGATCCTAATGATCCATATGGTAGCTGCAAACCAGATTTCATAATGGGATGTGCAGAAGATGAACTTAGCAACAGGCAAGATCTCTATGAGTTTGAGGTTTTGATCAATACTGATTGGCCTCTTGCAGACTATGTGCTTCAAAGTCCTTTCACTGAAGATGAATGCAGACAGTCTTGTATGGAAGATTGCATGTGTGCTGTTGCAATTTTCAGGTTAGGTGATCACTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGGAAAGTTGATGCTACACTTAATGGTGCTAAGGCCTTTATTAAAGTGAGGAAAGATAATTCCTCCTTTGTTGTTCCTACAATCATTGTGAACAAGAATAGGAGCACTTTGATTATGGTTGGATCTTTCCTTTTGGGTAGCTCAGCTTTTCTCAATCTCATATTGATTGTTGCAATATGCTTGAGCACTTCCTTCATTTTTCAGTACAAGAAGAAGCTTAGAAGAGTTAGCAAAAGTGACACTGTTGCTGAAACCAATTTGCGTTGCTTCACTTATGAGGAGCTTGAAGAAGCTACCAATGGATTTGACAAGGAGCTAGGAAGGGGTGCTTTTGGTATTGTTTATGAAGGAGTAATAAACATAGGTTCCACAACTCGTGTGGCAGTTAAAAAGTTGAACACTTTTCTCTTGGATGAGGTTCAGAAGGAATTCAAGAATGAACTGAATGTCATTGGTCTCACACATCATAAGAACTTGGTTCGTTTGCTTGGATTTTGTGAGGCTGAAGAAGAACGGTTACTAGTTTATGAGTACATGAGCAATGGCACTTTAGCAAGTTTTCTTTTCAATGGGGAAAAACCAAGTTGGAAACTTAGATTACAAATTGCATTTGGTATTGCTAGAGGACTTAGATATTTACATGAAGAGTGCAACACCCAAATCATCCATTGTGACATAAAGCCTCAAAACATTCTCCTTGATGATTACTTTAATGCAAGGATTTCTGACTTTGGATTGGCTAAGCTTTTGAAAATGAACCAAAGCAGAACCAATACTGGCATAAGGGGAACAAAAGGGTATGTTGCAATTGAATGGTTTAGAAACATGCCTATCACAGCTAAAGTGGATGTGTATAGCTATGGGGTATTGCTACTTGAGATAATAGCATGCAGAAAAAATGTAGAAATGGAGATAGAAAATGAAGGGAAAGCAATCCTAACTGATTGGGCTTGTGACTGCTATGCAGATGGTAATTTGGCTGCCTTGGTTGAGAATGACAAGGAAGCATTGGATGATAAGAAGAACTTGGAGAGGTTGGTAATGATTGCCATTTGGTGTGTTCAAGAGGATCCATGTCTTAGACCCACCATGGGAAATGTGACACAAATGCTTGAAGGTGTTGTTGAAGTGCAAGTTCCACCATGCCCCGCACCTATTAGTATTCAATATTCTCTAGATTAA 2421 0.3916 MASSLLPLLLCSLILLPFCVLAQTRSQINVGDSLKAESSNSTWVVSPSGDFAFGFLPLTDTDLFILCIWYAKIPDKTIIWYANTDNPTPKDSKVELNANDGLVLTAPDGNQLWKTQGLSVGVANGVINDTGNFVLRDGNSNSVYETFKDRRDTLLPSQILEKGGKLSSRLMETNFSKGRFELVFQNDGNLVMHSINLPSGYANENYYESKTVESNTSSPGTQLVFDSFGNIYILRKNNEKYNFSEVSGVSTTQFYLRATLNFDGVFTLYQHPKSSSGNQGWTSIWSQPDNICSYNVNSGSGVCGYNSFCTLGDDKRPTCQCPKRYSLLDPNDPYGSCKPDFIMGCAEDELSNRQDLYEFEVLINTDWPLADYVLQSPFTEDECRQSCMEDCMCAVAIFRLGDHCWKKKLPLSNGKVDATLNGAKAFIKVRKDNSSFVVPTIIVNKNRSTLIMVGSFLLGSSAFLNLILIVAICLSTSFIFQYKKKLRRVSKSDTVAETNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINIGSTTRVAVKKLNTFLLDEVQKEFKNELNVIGLTHHKNLVRLLGFCEAEEERLLVYEYMSNGTLASFLFNGEKPSWKLRLQIAFGIARGLRYLHEECNTQIIHCDIKPQNILLDDYFNARISDFGLAKLLKMNQSRTNTGIRGTKGYVAIEWFRNMPITAKVDVYSYGVLLLEIIACRKNVEMEIENEGKAILTDWACDCYADGNLAALVENDKEALDDKKNLERLVMIAIWCVQEDPCLRPTMGNVTQMLEGVVEVQVPPCPAPISIQYSLD 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi736g00005 806 FunFam Uncharacterized protein 150 279 - -
Gabi736g00005 806 SMART blect_4 35 150 IPR001480 -
Gabi736g00005 806 ProSitePatterns Protein kinases ATP-binding region signature. 519 544 IPR017441 GO:0005524
Gabi736g00005 806 SMART serkin_6 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi736g00005 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Gabi736g00005 806 SUPERFAMILY Protein kinase-like (PK-like) 496 785 IPR011009 -
Gabi736g00005 806 FunFam Serine/threonine-protein kinase 151 295 - -
Gabi736g00005 806 CDD STKc_IRAK 519 786 - -
Gabi736g00005 806 CDD B_lectin 38 147 IPR001480 -
Gabi736g00005 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 148 - -
Gabi736g00005 806 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Gabi736g00005 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 796 - -
Gabi736g00005 806 Pfam D-mannose binding lectin 77 160 IPR001480 -
Gabi736g00005 806 Gene3D Phosphorylase Kinase; domain 1 486 591 - -
Gabi736g00005 806 Gene3D - 20 149 IPR036426 -
Gabi736g00005 806 Gene3D Transferase(Phosphotransferase) domain 1 592 791 - -
Gabi736g00005 806 Coils Coil 739 759 - -
Gabi736g00005 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 209 IPR036426 -
Gabi736g00005 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 792 - -
Gabi736g00005 806 PIRSF SRK 1 805 IPR024171 GO:0004674
Gabi736g00005 806 FunFam S-receptor-like serine/threonine-protein kinase 482 591 - -
Gabi736g00005 806 ProSiteProfiles Protein kinase domain profile. 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi736g00005 806 Gene3D - 150 279 IPR036426 -
Gabi736g00005 806 Pfam Protein tyrosine and serine/threonine kinase 515 784 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi736g00005 Gabi-Chr736 53778 56414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi736g00005 495 796 Receptor kinase-like Gene Family AT1G60800 41.121 5.17e-71 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi736g00005 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi736g00005 - - gmx:100815462 1249.19