Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi734g00005 ATGGACCATTACAAGGTTCTAGGTTTACATAGAACCGCAACGAAGGAAGAAGTCAAAGCAGCGTTCAAGAAATTGGCGTTTCAGTTCCACCCTGACAAGCATTCCCAATCTCCAAGGGCCGTTAGGGACAACGCCACTTTTCGATTCAAGCAGGTTTCCGAGGCCTACGAGGTCCTCATGGACGATCGCAAGCGCGCCGATTTCAATTTCCGGTGGCGTTCCGGCGCCGGCGGTGGAGCCGCCAGCAACAACTATTATTCTCAGTATAATTATGGATACGGTAGGAGTGGGAGCAGTTACGAATATAGATCTAGGTCTGGGTTCAATGGTGATGGCTTCGCGTCCAAGTTTGAGCTCGCTCTTCGGATTTTGACGGCGCGATCTTCTCTTCTTAATCTTAGCTTCGCAGCAGCTATTTTAGGTGGGATAATTGTCATCAATACAAGCGGAGAATCCTTATGGAAGATGCAAAATTCTGGGAGATACTGA 489 0.4847 MDHYKVLGLHRTATKEEVKAAFKKLAFQFHPDKHSQSPRAVRDNATFRFKQVSEAYEVLMDDRKRADFNFRWRSGAGGGAASNNYYSQYNYGYGRSGSSYEYRSRSGFNGDGFASKFELALRILTARSSLLNLSFAAAILGGIIVINTSGESLWKMQNSGRY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi734g00005 162 CDD DnaJ 2 61 IPR001623 -
Gabi734g00005 162 PRINTS DnaJ domain signature 4 22 IPR001623 -
Gabi734g00005 162 PRINTS DnaJ domain signature 22 37 IPR001623 -
Gabi734g00005 162 PRINTS DnaJ domain signature 44 64 IPR001623 -
Gabi734g00005 162 SMART dnaj_3 1 64 IPR001623 -
Gabi734g00005 162 Gene3D DnaJ domain 1 122 IPR036869 -
Gabi734g00005 162 SUPERFAMILY Chaperone J-domain 1 95 IPR036869 -
Gabi734g00005 162 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Gabi734g00005 162 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Gabi734g00005 162 PANTHER CO-CHAPERONE PROTEIN DJLA 4 114 - -
Gabi734g00005 162 FunFam DnaJ domain protein 1 91 - -
Gabi734g00005 162 Pfam DnaJ domain 2 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi734g00005 Gabi-Chr734 90793 96303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi734g00005 3 66 C2H2 Transcription Factor Family AT1G74250 37.500 3.08e-10 55.8