Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi730g00010 ATGGCCAATTCAATCTTATTGGCTTTTTTGCTTTTGCTTTTGCTTTTGCCTTTTCAATATTCATCTTCATTCTCCCTCTCTGTGGAGAAACTCAAAGAAGACGTTATAGTTTCACCCAATGGCACATTCACCGCAGGCTTTTATCCCGTAGGAGAAAATGCTTACTGCTTCTCCATATGGTTCACCAAACTTGCATATAAACATGGCCAAAATGCCACCATAGTTTGGATGGCAAACCGTGACCAACCAGTGAATGGAAAAGGCTCAAAACTTTCCCTTCTTAAGAATGGTAACCTCATCTTAACAGATGCAGGACAGTTCATAGTTTGGACCACAAACACCAACTCATCCAACCAACTTGAGTTTCTTTTGTACGACACTGGAAACCTCGTACTTCAAGAACAAAACAATGGTTTCATTCTGTGGCAAAGCTTCGATTACCCAACAGATACACTCCTTCCTGATCAAAATTTCACAAGGTACATGAAGCTTGTTTCCTCAAGAAGAGAGAGCAACTATTCTTCTGGCTTCTACAAGCTATTCTTTGATAACGACAATGTTCTTCGTCTTCTTTATGATGGTCCTCAAGTTTCAAGTGTTTATTGGCCAGATCCTTGGCTTCTCGCTTGGGATGCTGGTAGATCCACTTACAACAGTAGCAGGGTTGCAGCACTTGATCGTTTGGGGAAATTCAGTTCTTCTGATGGTTTCACTTTGAAGACATTGGATTATGGGACAGTGCTCCAACGAAGACTAACCCTTGATCATGATGGTAATCTTCGTGTATATAGCTGGAAAAAGGGACAAGATATGTGGTTAATATCAGGGCAAGCCAAACAACAAGCTTGTAAGATTCATGGGATTTGTGGACCCAATAGTGTTTGCAGTGTTGATCCAAGTGCTGGTAGTAGGTGTAGGTGTCTTCCAGGCTTCAGCATGGTCAACAATGAAGATTGGTCTCAAGGGTGCAAACCAAACTTCCAACTACCCTGCAACAACAACAACACCGAGTCTCGCTTCTTGTTCCTACCCCATGTCGCATTTTATGGATATGACTATAACTACCATGAGAATTACACCTTTGAACAATGTAAGCTTTTGTGTTTGCAATTGTGTGAATGTGTAGGCTTCCAGTACGACCCTTTTGAGTCCGCTAGTGTCTTTAGATGTTACATAAAGTCACAGTTGCTAAATGGGTATCAATCATTAGATTTCACTGGATCAAGCTTCTTGCGATTGCCGGAAAGCAGAACTTTTTCCTTTGAGAAGAACCCCATCAAAGATAATAGCTTGGTTTGTTCAAGAAATGGAACAGAACTTGAAAGGTCATACCTGAATGACAAAGAAAATGGATCAGTGAAGTTCATGCTTTGGTTTGCGTGTGGCTTGGGAGGTATTGAGATAGTGTGCATCTTTCTGGTGTTGTGTTTCTTAATTAGAAATAGGAAACACCTCGGTGAAGACTCAAAGGGATATGTTCTTGCAGCAGAAACAGGATTTCAGAGATTCAGTTACTCTGAACTGAAACAAGCCACAAAAGGTTTCAGTCAAGAGATTGGAAGGGGAGCTGGTGGAATTGTCTATAAGGGTGTGTTATCAGATAATAGAGTTGCAGCAATAAAGCAACTATATGAGGCAAACCAAGGAGAAAGTGAGTTCCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTGGGGTTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTGTATGAGTACATGGAAAATGGTTCTTTAGCTGAAAATATCTCATCAAATTCACTTGATTGGGGTAAGAGATATAGCATTGCTTTGGGTACAGCAAGAGGACTGGCTTACCTACATGAAGAATGTTTGGAGTGGATCTTGCATTGTGATATAAAGCCTCAAAATATACTTCTTGATTCTGATTTTCAACCCAAGGTTGCGGATTTTGGCTTGTCTAAGCTTCTCCATCGGAATGATCTCAACAATTCAAGCTTCTCAAGGATAAGAGGTACAAGAGGTTACATGGCACCAGAATGGGTTTTCAACTTGCCAATCACTTCCAAAGTTGATGTTTATAGCTATGGAATTGTTGCCTTGGAGATGATAACTGGAAAGAGCCCAATGGCAAGTATCCAAATTGCAGAGGGAGCAGAGTCTCATCATGAGAGGTTGGTAACATGGGTGAGGGAGAAAAGGAGAAAAGGATCTGAAGTGGAATCTTGGGTGGAAAAAATCATTGACACTGCATTGGGATCAAACTATGACATAAATAAAATGGAAATTTTGGCTACATTGGCTTTGGAATGTGTGGAGGAAGAGAGAGACGCGAGACCCAGCATGAGTCAAATTGTTGAGAGGCTCCAAAGCTATGAACATGATTCTTGA 2394 0.4106 MANSILLAFLLLLLLLPFQYSSSFSLSVEKLKEDVIVSPNGTFTAGFYPVGENAYCFSIWFTKLAYKHGQNATIVWMANRDQPVNGKGSKLSLLKNGNLILTDAGQFIVWTTNTNSSNQLEFLLYDTGNLVLQEQNNGFILWQSFDYPTDTLLPDQNFTRYMKLVSSRRESNYSSGFYKLFFDNDNVLRLLYDGPQVSSVYWPDPWLLAWDAGRSTYNSSRVAALDRLGKFSSSDGFTLKTLDYGTVLQRRLTLDHDGNLRVYSWKKGQDMWLISGQAKQQACKIHGICGPNSVCSVDPSAGSRCRCLPGFSMVNNEDWSQGCKPNFQLPCNNNNTESRFLFLPHVAFYGYDYNYHENYTFEQCKLLCLQLCECVGFQYDPFESASVFRCYIKSQLLNGYQSLDFTGSSFLRLPESRTFSFEKNPIKDNSLVCSRNGTELERSYLNDKENGSVKFMLWFACGLGGIEIVCIFLVLCFLIRNRKHLGEDSKGYVLAAETGFQRFSYSELKQATKGFSQEIGRGAGGIVYKGVLSDNRVAAIKQLYEANQGESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMENGSLAENISSNSLDWGKRYSIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDFQPKVADFGLSKLLHRNDLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVALEMITGKSPMASIQIAEGAESHHERLVTWVREKRRKGSEVESWVEKIIDTALGSNYDINKMEILATLALECVEEERDARPSMSQIVERLQSYEHDS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi730g00010 797 Gene3D Phosphorylase Kinase; domain 1 479 587 - -
Gabi730g00010 797 SUPERFAMILY Protein kinase-like (PK-like) 496 791 IPR011009 -
Gabi730g00010 797 ProSiteProfiles Bulb-type lectin domain profile. 22 145 IPR001480 -
Gabi730g00010 797 FunFam Serine/threonine-protein kinase 588 797 - -
Gabi730g00010 797 CDD STKc_IRAK 519 791 - -
Gabi730g00010 797 ProSiteProfiles PAN/Apple domain profile. 331 418 IPR003609 -
Gabi730g00010 797 Gene3D Transferase(Phosphotransferase) domain 1 588 797 - -
Gabi730g00010 797 FunFam S-receptor-like serine/threonine-protein kinase 481 587 - -
Gabi730g00010 797 ProSiteProfiles EGF-like domain profile. 279 317 IPR000742 -
Gabi730g00010 797 FunFam Putative receptor protein kinase ZmPK1 18 147 - -
Gabi730g00010 797 Pfam D-mannose binding lectin 73 161 IPR001480 -
Gabi730g00010 797 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Gabi730g00010 797 CDD B_lectin 36 148 IPR001480 -
Gabi730g00010 797 SMART blect_4 27 148 IPR001480 -
Gabi730g00010 797 FunFam Serine/threonine-protein kinase 149 276 - -
Gabi730g00010 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Gabi730g00010 797 SMART serkin_6 513 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi730g00010 797 CDD PAN_AP_plant 327 414 - -
Gabi730g00010 797 PIRSF SRK 1 796 IPR024171 GO:0004674
Gabi730g00010 797 Gene3D - 28 146 IPR036426 -
Gabi730g00010 797 PANTHER OS07G0415500 PROTEIN 6 794 - -
Gabi730g00010 797 Pfam S-locus glycoprotein domain 249 313 IPR000858 GO:0048544
Gabi730g00010 797 Pfam Protein kinase domain 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi730g00010 797 ProSiteProfiles Protein kinase domain profile. 513 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi730g00010 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 204 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi730g00010 Gabi-Chr730 156494 159050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi730g00010 482 794 Trihelix Transcription Factor Family AT5G38560 43.692 1.06e-69 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi730g00010 Pkinase 8.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi730g00010 - - gmx:100806357 1074.69