Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi730g00009 ATGGCCTCTTCAATCTTATTCACTCTTCTTCTTTTCATTTTGTCTTTTCCATATTCATCTTCATTCTCCCTTTCTGTGGAGAAACTCGATGAAGATGTTATAGTTTCCCCCAATGGCAAATTCACTGCAGGTTTTTATCCCGTAGGGGAAAATGCTTACTGTTTCTCAATATGGTTCACCCAAACTTATCATAAACATGGCCAAAATGCCACCATAGTTTGGATGGCAAACCGTGACCAACCAGTGAATGGAAAAGGCTCAAAACTTTCCCTTCTTAAGAATGGTAACCTCATCTTAACAGATGCAGGACAATTCATAGTTTGGACCACAAACACTGACTCATCAAACCCACTTGAGTTTCTTTTATACGACACAGGAAACCTTGTACTTCAAGAACAAAACAATGGTTTCATTCTGTGGCAAAGTTTTGATTACCCAACAGATACACTTCTTCCTGATCAACATCTCACAAGGTACATGAAGCTTGTTTCCTCAAGAAGTGAGAGCAACTATTCCTCAGGCTTCTATAAACTCTTCTTTGACAATGACAATGTTCTTCGTCTTCTTTACGATGGTCCTCAAGTTTCAAGTGTTTATTGGCCAGATCCTTGGCTTGTAAGCTGGGAAGCTGGTAGATCTACTTACAATAGTAGCAGAGTTGCAACACTTGATCTTTTGGGGAAGTTCCATTCTTCAGATGGTTTCATTCTCAAGACATCTGATTATGGGACAGTGCTTCAACGAAGACTAACCCTTGATCATGATGGTAATGTTCGTGTATATAGCTTGAAACATGGACGAGATTATTGGTCAGCATCAGGGCAAGTCAAGCAACAACCTTGCAAGATTCATGGGATTTGTGGACCCAATAGTACTTGTAGTAATGATCCAAGTACTGGTAGAAAGTGTTCATGTCTTCCAGGTTATAGCAGGGTTAACAATCAAGATTGGTCTCAAGGGTGCAAACCAAACTTTCAACTAACTTGTAACAACAACAACACTGAGTCTCGCTTCCAATTCATACCCCATGTTGAGTTTTATGGATTTGACCTTTGGTACTATGACAATTACACCTTTAAACAATGTAGGCATTTGTGCTTGCGAATGTGTGAATGCATTGCCTTCCAATTTACACGCTTTGAGAGCCAGAGTTTCTTTAAATGTTACACAAAGATACAGTTGCTAAATGGGTATCATTCACCCAGTTTCCCAGGATCACTCTACTTGCGATTGCCGAAAAGAAGTAATTTTTCCTATGAGAAGAACCCCATCAAAGATAATAGCTTGGTTTGTTCAAGAAATGGAACAAAACTTGAAAGGCCATACCTGAATGACAAAGAAAATGGATCAGTGAAGTTCATGCTTTGGTTTGCGAGTGGCTTAGGAGGAATTGAGGTAGTGTGCATATTTCTGGTTTGGTGTTTCTTGATTAGAAATGGGAAACACTTGGGTGCAGACACACAGGGCTATGTTCTTGCAGCAGCAACAGGATTTAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACAAAAGGTTTCAGTCAAGAGATTGGAAGGGGAGCTGGTGGAATTGTCTATAAGGGTGTGTTATCAGATAATAGAGTTGCAGCAATAAAGCAACTATATGAGGCAAACCAAGGAGAAAGTGAGTTCCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAATTTAATTGGCATGTGGGGTTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAAAATGGTTCTTTAGCTGAAAATATCTCATCAAATTCACTTGATTGGGGTAAGAGGTATAGCATTGCTTTGGGTACAGCAAGAGGACTGGCTTACCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGCGATATAAAGCCTCAAAATATACTTCTTGATTCTGATTTTCAACCCAAGGTTGCTGATTTTGGCTTGTCTAAGCTTCTCCATCGGAATGATCTCAACAATTCAAGCTTCTCAAGGATTAGAGGTACAAGAGGTTATATGGCACCAGAATGGGTTTTCAACTTGCCAATCACTTCCAAAGTTGATGTTTATAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAAAGAGCCCAATGACAGGTATCCAAATTGCAGAGGGAGCAGAGTCTCATCATGAGAGGTTGGTAACATGGGTGAGGGAGAAAATGAGGAAAGGATCAGAAGTGACATCTTGGGTGGAAGAGATCATTGACCCTTCATTGGGATCCAATTATGACATAAATAAAATGGAGATTTTGGCTACAATGGCTTTGGAATGTGTGGAGGAAGAGAGAAACGTGAGGCCTAGCATGAGTCAAATTGCTGAGAGGCTACAAAGCCATGAACAAGATTCTTGA 2388 0.4016 MASSILFTLLLFILSFPYSSSFSLSVEKLDEDVIVSPNGKFTAGFYPVGENAYCFSIWFTQTYHKHGQNATIVWMANRDQPVNGKGSKLSLLKNGNLILTDAGQFIVWTTNTDSSNPLEFLLYDTGNLVLQEQNNGFILWQSFDYPTDTLLPDQHLTRYMKLVSSRSESNYSSGFYKLFFDNDNVLRLLYDGPQVSSVYWPDPWLVSWEAGRSTYNSSRVATLDLLGKFHSSDGFILKTSDYGTVLQRRLTLDHDGNVRVYSLKHGRDYWSASGQVKQQPCKIHGICGPNSTCSNDPSTGRKCSCLPGYSRVNNQDWSQGCKPNFQLTCNNNNTESRFQFIPHVEFYGFDLWYYDNYTFKQCRHLCLRMCECIAFQFTRFESQSFFKCYTKIQLLNGYHSPSFPGSLYLRLPKRSNFSYEKNPIKDNSLVCSRNGTKLERPYLNDKENGSVKFMLWFASGLGGIEVVCIFLVWCFLIRNGKHLGADTQGYVLAAATGFRRFSYSELKQATKGFSQEIGRGAGGIVYKGVLSDNRVAAIKQLYEANQGESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMENGSLAENISSNSLDWGKRYSIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDFQPKVADFGLSKLLHRNDLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSPMTGIQIAEGAESHHERLVTWVREKMRKGSEVTSWVEEIIDPSLGSNYDINKMEILATMALECVEEERNVRPSMSQIAERLQSHEQDS 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi730g00009 795 Pfam Protein kinase domain 514 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi730g00009 795 CDD PAN_AP_plant 325 412 - -
Gabi730g00009 795 SUPERFAMILY Protein kinase-like (PK-like) 495 788 IPR011009 -
Gabi730g00009 795 CDD B_lectin 34 146 IPR001480 -
Gabi730g00009 795 Gene3D Transferase(Phosphotransferase) domain 1 586 795 - -
Gabi730g00009 795 ProSiteProfiles Bulb-type lectin domain profile. 19 143 IPR001480 -
Gabi730g00009 795 Gene3D Phosphorylase Kinase; domain 1 481 585 - -
Gabi730g00009 795 Pfam S-locus glycoprotein domain 247 311 IPR000858 GO:0048544
Gabi730g00009 795 CDD EGF 280 314 - -
Gabi730g00009 795 SMART serkin_6 511 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi730g00009 795 PIRSF SRK 1 795 IPR024171 GO:0004674
Gabi730g00009 795 FunFam Putative receptor protein kinase ZmPK1 15 145 - -
Gabi730g00009 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 200 IPR036426 -
Gabi730g00009 795 ProSiteProfiles EGF-like domain profile. 277 315 IPR000742 -
Gabi730g00009 795 ProSiteProfiles PAN/Apple domain profile. 329 412 IPR003609 -
Gabi730g00009 795 PANTHER OS07G0415500 PROTEIN 4 792 - -
Gabi730g00009 795 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Gabi730g00009 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Gabi730g00009 795 CDD STKc_IRAK 517 789 - -
Gabi730g00009 795 Gene3D - 26 145 IPR036426 -
Gabi730g00009 795 FunFam S-receptor-like serine/threonine-protein kinase 481 585 - -
Gabi730g00009 795 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi730g00009 795 FunFam Serine/threonine-protein kinase 586 795 - -
Gabi730g00009 795 Pfam D-mannose binding lectin 71 159 IPR001480 -
Gabi730g00009 795 SMART blect_4 25 146 IPR001480 -
Gabi730g00009 795 FunFam Serine/threonine-protein kinase 147 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi730g00009 Gabi-Chr730 109089 112423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi730g00009 501 793 Trihelix Transcription Factor Family AT5G38560 44.482 2.90e-70 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi730g00009 Pkinase 1.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi730g00009 - - gmx:100806357 1110.52