Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi730g00006 ATGGGGGGTACCTCACCTTGTGCTTCCTGCAAATTGTTGAGACGACGTTGCACAAAGGAATGCATCTTCGCTCCTTATTTTCCTTCCGATGACCCTCGCAAGTTTGCCATTGTGCACAAGGTCTTTGGTGCTAGCAATATCAGCAAAATGCTTCAGGAGCTTCCAGTTAATCAAAGAGCAGATGCAGTTAGCAGTTTAGTTTACGAGGCAAATGCAAGAGTGAGAGACCCTGTGTATGGATGTATTGGAGCCATATCATACCTTCAAAACCAAGTTTCACAATTGCAAATGCAGCTTGCAATGGCTCAAGCAGAGATTCTCTGCATCCAGATGCAGCAAGAACCTACCTTACCCTCGCAGCTAGACCAAGATGACAAATCGCTGTTCTTATCTGACAACTATAATAACTACGATATCCTTCCTCAGTATCTCAGCTTTCCTTCATCTTCTTCCTCATCTTCCAATGTATTCCAAGACTCTGAGCCTCTTAAGAGAGAGTCTTTTTGGACTTGA 513 0.4386 MGGTSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPVNQRADAVSSLVYEANARVRDPVYGCIGAISYLQNQVSQLQMQLAMAQAEILCIQMQQEPTLPSQLDQDDKSLFLSDNYNNYDILPQYLSFPSSSSSSSNVFQDSEPLKRESFWT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi730g00006 170 Coils Coil 85 105 - -
Gabi730g00006 170 MobiDBLite consensus disorder prediction 147 161 - -
Gabi730g00006 170 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Gabi730g00006 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 136 - -
Gabi730g00006 170 MobiDBLite consensus disorder prediction 147 170 - -
Gabi730g00006 170 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi730g00006 Gabi-Chr730 84237 85522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi730g00006 3 170 AS2 family AT2G30130 63.590 4.60e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi730g00006 LOB 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi730g00006 - - gmx:100780073 271.937