Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi71g00005 ATGAAGGGCATACGCAATTTTTTGCAAGGGTTGAAACCAGCCATTCTAATGGTGTTTGCGCAGGTTGCATATGCTGCGGTGAATGTGATCTACAAGATTGCCATAGAAGATGGAATGAGCATGAGGGTGGCTACTGCCTATCGCCTCGTTTTTGCATCGGCTTTCACTATCCTCCTTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGATTACTCGGAGGGTGCTTTATATGACATTTCTTTGTGGATTATTTGGGGCAAGTGCATATCTAAACCTTTACCTTGAGGCTCTGGCTTTGACATCAGCAACGTTTGTATTGGCTATGCTCAACCTTGTTCCAGGCATTACCTTTATCATGGGCATATCCTCCGGATTCGAAAAATTAAATTTGGGATCAGGAGAAGGAAAGGCAAAGGTAATAGGAACAATAACTGGAATTAGCGGGGCAATGCTGTTGACGTTTTTCAAAGGGGTAGAAATTAATTTGTGGTCTTCAAAAATCAACCTTTTGCATCCACATCAAAACGACAATGGTCATATGGCAACACAACATGGTGATTCTGGTAGTAAACTGTGGGGTGTACCATGTGCCCTTGCAAGTTGCTGCTGTTTTTCTTTGTGGTTCATTATTCAGGCTAAGTTGAATGAAGAATTCCCGTACCCTCATTCAAGTGCAGCTTTAATGTCCACAATGGGAGCGGTACAGGCAACTATTTTTGCTCTCTGTGTTGATAGGGACATGAGCCAATGGAAGCTCGATTACGGTATCAGGCTTTTAGCTGTGATTTATCCGGGAATTGTGGTCTCTGGAATAGTGGTGATTGTTTATAACTGGTGCATAAAGATGAGAGGCCCACTATTTGCGTCTATTTTCAATCCTCTACAGCTTCTGCTTGTGGTTATCGCTGCTTATTTGATGTTGGATGAGAAGTTATATTTAGGATGTGTGCTTGGAGCAGTGCTGATCGTGTGTGGTCTATACGCGGTGCTTTGGGGTAAGGGAAAAGAAATGAAAAAGAAGACTCATCTCGTTCCATTTGAAATTACAAGAGAGTCCGAAGCTGTTCAGGTTGTTGTTACGTGCACGCCAGTAGATCATGATAAATATGTCCAAAGCTCCCTGAATCAAACTAATACTACCGGGAAGGTTGCTGATGATCACTGA 1167 0.4259 MKGIRNFLQGLKPAILMVFAQVAYAAVNVIYKIAIEDGMSMRVATAYRLVFASAFTILLALIFDRKKRPKITRRVLYMTFLCGLFGASAYLNLYLEALALTSATFVLAMLNLVPGITFIMGISSGFEKLNLGSGEGKAKVIGTITGISGAMLLTFFKGVEINLWSSKINLLHPHQNDNGHMATQHGDSGSKLWGVPCALASCCCFSLWFIIQAKLNEEFPYPHSSAALMSTMGAVQATIFALCVDRDMSQWKLDYGIRLLAVIYPGIVVSGIVVIVYNWCIKMRGPLFASIFNPLQLLLVVIAAYLMLDEKLYLGCVLGAVLIVCGLYAVLWGKGKEMKKKTHLVPFEITRESEAVQVVVTCTPVDHDKYVQSSLNQTNTTGKVADDH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi71g00005 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 336 - -
Gabi71g00005 388 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Gabi71g00005 388 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
Gabi71g00005 388 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Gabi71g00005 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi71g00005 Gabi-Chr71 95413 98978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi71g00005 11 342 Nodulin-like Gene Family AT1G25270 41.867 1.85e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi71g00005 - - gsj:114424758 504.212