Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi71g00003 ATGAAGGGCATATGTAATTTTTTGCAAGGGTTGAAACCAGCCATTCTAATGGCTTTTGCGCAGGTTGCATTTGCTGCGGTGAATGTGATCTACAAGATTGCCATAGAAGATGGAATGAGCATGAGGGTTGCTACCGCCTATCGCCTCATTTTAGCATCGGCTTTCACTATCCCCCTTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGATTACTCGGAGGGTGATTTATATGACATTTCTTTGTGGATTATTTGGGGGAAGTGGATATCTAAACCTTTACCTCGAGGCTCTGGCTTTGACATCAGCAACGTTTGTGTTGGCTATGCTCAACCTTTGTCCAGGCATTACCTTTATCATGGGCATAGCCTCCGGATTCGAAAAATTAAATTTGAGATCAGGAGAAGGAAAGGCAAAGGTAATAGGAACAATAACTGGAATTAGCGGGGCAATGCTGTTGACGTTTTTCAAAGGGGTAGAAATTAATTTGTGGTCTTCAAAAATCAACCTTTTGCATCCCCATCAAAACGACAATGGTCATATGGCAACACATCATGGTGATTCTGGTAGTAAACTGTGGGGTGTACCGTGTGCCCTTGCAAGTTGCTGCATTTTTTCTCTGTGGTTCATTATTCAGGCTAAGTTGAATGAAGAATTCCCGTGCCCTCATTCAAGTGCAGCTTTAATGTCCACAATGGGAGCGGTACAGGCAACTATTTTTGCTCTCTGTGTTGATAGGGACATGAGCCAATGGAAGCTCGATTACGGTATCAGGCTTTTAGCTGTGATTTATCCGGGAATTGTGGTCTCTGGAATAGTGGTGATTGTTTATAACTGGTGCATAAAGATGAGAGGCCCACTATTTGCGTCTATTTTCAATCCTCTACAGCTTCTGCTTGTGGTTATCGCTGCTTATTTGATGTTGGATGAGAAGTTATATTTAGGATGTGTGCTTGGCGCAGTGCTGATCGTGTGTGGTTTATACGCGGTGCTTTGGGGTAAGGGAAAAGAAATGAAAAAGAAGACTCAACTCGTTCCATTTGAAATTACAAGAGAGTCCGAAGCTGTTCAGGTTGTTGTTACGTGCACGCCAGCAGATCATGATAAATATGTCCAAAGCTTCCTGAATCAAACTAATACTACCGAGAAGGTTGCTGATGATCACTGA 1167 0.4267 MKGICNFLQGLKPAILMAFAQVAFAAVNVIYKIAIEDGMSMRVATAYRLILASAFTIPLALIFDRKKRPKITRRVIYMTFLCGLFGGSGYLNLYLEALALTSATFVLAMLNLCPGITFIMGIASGFEKLNLRSGEGKAKVIGTITGISGAMLLTFFKGVEINLWSSKINLLHPHQNDNGHMATHHGDSGSKLWGVPCALASCCIFSLWFIIQAKLNEEFPCPHSSAALMSTMGAVQATIFALCVDRDMSQWKLDYGIRLLAVIYPGIVVSGIVVIVYNWCIKMRGPLFASIFNPLQLLLVVIAAYLMLDEKLYLGCVLGAVLIVCGLYAVLWGKGKEMKKKTQLVPFEITRESEAVQVVVTCTPADHDKYVQSFLNQTNTTEKVADDH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi71g00003 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 336 - -
Gabi71g00003 388 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Gabi71g00003 388 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Gabi71g00003 388 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
Gabi71g00003 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi71g00003 Gabi-Chr71 60856 65554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi71g00003 1 340 Nodulin-like Gene Family AT1G68170 41.765 6.71e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi71g00003 - - gmx:100803545 505.753