Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi71g00002 ATGGTGAAGATTAAGGGCATATGCAATATATTGGAAGGGTTGAAACCAGCCATGCTAATGGTGTTTGTGCAGATTGCATATGCTGCGGTGAATGTGCTTTACAAGCTCGCCATAAATGATGGAATGAGCATGAGAGTAGCTACTGCTTATCGCCTCACTTTTGCAGCGGCTTTCACTATCCCTCTTGCTCTTATCTATGATAGGAAGAAGAGACCAAAGATTACTTGGAGAGTGCTTTCCATGGCATTTCTTAGTGGATTGTTTGGGGGTAGTTTATCTTTAAACCTATACTCCGAGGGCCTGGCTTTAACGTCAGCAACGTTTATGTTGGCCATGCTCAACCTTATTCCGGGCATTACCTACATCATGGCCATATCTTCCGGATTCGAAAAATTAAATTTGGGTGTAGTAGAAGGAAAGGCCAAGGTGATAGGAACAATAATTGGAATTGGTGGGGCAATGTTGTTGACCTTTTTCAAAGGGATAGAAATTGATATTTGGTCTTCCAAAATCAACCTTATGCATCCACATCACAGCCAAAATGGACATACTCGGAGTAAAATGTTTGGGATTTCATGTGCCATAGCAAGCTGCTGCTCTTTTTCTTTGTGGTTCATCATTCAGGCTAAGATGAATGAAGAATACCCAAGCCATCACTCAACCTCAGCTTTAATGTCCACAATGGGAGCGACACAGGCCATTGTTCTTGCTCTTTGTGTTGACAGGGATTGGAGCCAATGGAAGCTCGGTTACAATATCAGGCTTCTAACTGTGGCTTATTCGGGAATTGTGACCTCTGGAATAGTAATTATTGTTACTGCATGGTGCATAAAGATGAGAGGCCCACTATTTGCGTCTATTTTCAATCCTCTACAGCTTTTGCTTGTGGCTGTCGCTGCTTATTTGATGTTGGATGAGAAGTTATATTTAGGAAGTGTGCTTGGAGCAGTGCTGATCGTGTGTGGCCTATACGCGGTGCTTTGGGGTAAGGGCAAAGAAATGAAAAAGAAGACACAGTCAGTTCCATTTGAAAATGAAGGCATTAGGAGCTCAGTAGTTGTTAGTAGTTATTAG 1074 0.4236 MVKIKGICNILEGLKPAMLMVFVQIAYAAVNVLYKLAINDGMSMRVATAYRLTFAAAFTIPLALIYDRKKRPKITWRVLSMAFLSGLFGGSLSLNLYSEGLALTSATFMLAMLNLIPGITYIMAISSGFEKLNLGVVEGKAKVIGTIIGIGGAMLLTFFKGIEIDIWSSKINLMHPHHSQNGHTRSKMFGISCAIASCCSFSLWFIIQAKMNEEYPSHHSTSALMSTMGATQAIVLALCVDRDWSQWKLGYNIRLLTVAYSGIVTSGIVIIVTAWCIKMRGPLFASIFNPLQLLLVAVAAYLMLDEKLYLGSVLGAVLIVCGLYAVLWGKGKEMKKKTQSVPFENEGIRSSVVVSSY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi71g00002 357 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020
Gabi71g00002 357 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
Gabi71g00002 357 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0016020|GO:0022857
Gabi71g00002 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Gabi71g00002 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi71g00002 Gabi-Chr71 40622 46225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi71g00002 14 340 Nodulin-like Gene Family AT1G25270 42.553 1.30e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi71g00002 - - gmx:100803545 485.337