Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi71g00001 ATGGTTAATTTATACAAAGTTGAAGCCATAGGTGGTGTGAAGCCTGTACTGTTAATGATAGTGGTCCAGTGTTTATATGCAGCAGTGAATATCTTGTTAAAGATCGTAGCAAATGATGGAATGAGCTTAAGTGTTCTTATTGCTTACCGCTTCATCTTTGCTGCTGGCTTCATTATTCCCTTTGCTCTCATCTTTGAAAGGAAAAGCCTGCAACAACTTACTGGGAAAGTTCTACTCTATGCTTTTTTTTGTGGGTTGTTTGGGGGATCCTTACTACAAAACCTCTATGTTAAAGCTTTGGCCTTGGTATCTGCAACATATGCTACAACCATGTTGAACCTCATCCCCGCTGTTACCTACATCATGGCTGTTTCTCTTGGGCTGGAGAAGCCAAATCTTGGAACAACAGATGGGAAAGCCAAGTTGCTGGGTACTATAACTGGAATTGGTGGAGCAATGATCTTCACTTTCTACAAAGGCAAAAGGATATCCTTCTGGTCAACACACATTGACTTAGTGCAACATGCGGCATCACCTCATGGTGGAGCTACTGGTTCTGGCTTATGGGGCTGCATGCTAGCTCTGGGCACTTCTCTGAGTTACTCATTGTGGTTGATAATTCAGACAAAGATGAGTGAGAAGTTTCCATGGCACTATTCAATTGCTGCTTTAACCTGTACAAGCAGCTCAATCCAATCCGTTATATTTGCTCTTTGTACGGAGAGAGATTGGAGCCAATGGAAACTTGACTGGAACTTGAGGCTTCTAGCAGCAGCTAGCTCGGGTATCTTGGCCTCTGGGGTGTGTTATACCCTAATAGCATGGTGTGTGAGTAGGAGGGGACCTTTGTTTGCTTCTGCTTTTAGTCCGCTAATGCTTGTGCTAGTGACCCTGGCGGGTTCATTGGTACTAGATGAGACTATTCACATTGGAAGTATAACAGGAGCAGTGTTGATTGTGTGCGGATTGTACATGTTATTGTGGGGTAAGAGAAACGAAAGAATGAAGGCAGGGAGTGAGATAGTGTCCCCAAAAAGCTCTGCTCAATGTGAATCAGTCCACATTGCCAGATCTTTCGCATGCAACCAAAGAGAGTATGACAAGAAGATCGTTATTCTTGAAGGTCTATGGCAGGAAGGATTTATGGCACTTGCTGCAATTGGAGCCACAGCTATTGGGTCAATTGAGGTAACACAGCAACATTTTCGTGCTCAACCTTCTTCGTATTCTGCTACTCATCAGCCATAG 1248 0.4375 MVNLYKVEAIGGVKPVLLMIVVQCLYAAVNILLKIVANDGMSLSVLIAYRFIFAAGFIIPFALIFERKSLQQLTGKVLLYAFFCGLFGGSLLQNLYVKALALVSATYATTMLNLIPAVTYIMAVSLGLEKPNLGTTDGKAKLLGTITGIGGAMIFTFYKGKRISFWSTHIDLVQHAASPHGGATGSGLWGCMLALGTSLSYSLWLIIQTKMSEKFPWHYSIAALTCTSSSIQSVIFALCTERDWSQWKLDWNLRLLAAASSGILASGVCYTLIAWCVSRRGPLFASAFSPLMLVLVTLAGSLVLDETIHIGSITGAVLIVCGLYMLLWGKRNERMKAGSEIVSPKSSAQCESVHIARSFACNQREYDKKIVILEGLWQEGFMALAAIGATAIGSIEVTQQHFRAQPSSYSATHQP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi71g00001 415 PANTHER WAT1-RELATED PROTEIN 14 338 IPR030184 GO:0016020|GO:0022857
Gabi71g00001 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 331 - -
Gabi71g00001 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Gabi71g00001 415 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
Gabi71g00001 415 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi71g00001 Gabi-Chr71 6816 19990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi71g00001 13 367 Nodulin-like Gene Family AT1G25270 40.223 5.64e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi71g00001 - - aprc:113859960 554.288