Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi709g00003 ATGGCTCCTAAGCAGCCAAGTACGGGTCTCTTTGTTGGATTGAATAAAGGTCACGTTGTCACGAAGAAGGAATTGCCTTCACGCCCCTCTGATAGGAAAGGGAAAACTAGCAAGCGGGTGCACTTTGTAAGGAACCTCATCCGTGAGGTTGCTGGTTTTGCACCTTATGAAAAGCGTATAACTGAGTTACTGAAGGTTGGAAAAGATAAGAGAGCACTGAAGGTTGCCAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCAGAAAGATGAGGTCCGGTGGAGCCGGTGATAAGAAGAAGTAA 333 0.4625 MAPKQPSTGLFVGLNKGHVVTKKELPSRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi709g00003 110 MobiDBLite consensus disorder prediction 1 37 - -
Gabi709g00003 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Gabi709g00003 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gabi709g00003 110 MobiDBLite consensus disorder prediction 79 110 - -
Gabi709g00003 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Gabi709g00003 110 FunFam 60S ribosomal protein L36 1 106 - -
Gabi709g00003 110 MobiDBLite consensus disorder prediction 87 110 - -
Gabi709g00003 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 108 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi709g00003 Gabi-Chr709 59753 61495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi709g00003 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 84.615 3.67e-58 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi709g00003 K02920 - gmx:100526979 214.157