Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00202 ATGGGTAAATCTACCTCATGCTTCAAACTAATCACATGCGGCGGTGATGCGGCGGAGAAGGATGATTACCAAGTATCTGAGATCAATGATTCCAATGATAAATGTGGCTGGAGTTTCCGCAAGAAATCTGCAAGGAACCGTGTGCTTAGCAATACTGTTATAGCAAAGGTTCCATCTTCTGCAAATAAGGAGACTTCAGAATGTACTAGTTTTAATTTTCAACCACTTCCCGAGCCTAATGTTGTCGAGAAGATTTACACAACAAATTGCTCTGATGCGAAGCCCCAGTTATCCTCCTTTGAAAGCTCACAAATTTCTGAAATACATGTCATTGAAACTGAGAGTAAGGTGGATGTCAGTCCACCAGAGTCTACTGTTATCATCATCCAGGCTGCCATCAGAGGGTTATTGGCTCAGAGAGAACTGCTACTGCTTCAGAATGTAGTGAAGTTGCAATCTGCTGTTCGTGGGCACTTGGTCCGGAGGCAAGCCATAGGAACTCTGCGTTGTGTTCAGGCCATCATGAAAATGCAGGTCCTTTTAAGAGCTCGCCGTGCTCAGCAGTTGCGTCCGGAAAATCATTTAAATTCCAAGGATGGCAAAAATGATTCCTCAGAAGCTTTGGGGAATGAAAATCACATGATCAAATCAAATCTGAGGCACACTTCCATTGAGAAGCTGCTTAGCAATAGTTTTGCTCGTCAGCTGTTGGAATCAACACCAAAGAACAAACTTATCCATTTCAAGTGCGATCCTTCTAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGGTGGATGTCTGTATCATCTAAAGATATTGCAGAGGACAAGAAAACTAGTTCTCTGGCAGAGCAATCAGATGAAAGCAAAGACAGAACTTCTGTGTTTCAATTTGAAACAGGTATTCCATCTGAAGTTTTTCTCGAGTCAACTAACTCAAAGCCCACTGTTGGGGATTCGCCTCTGCTTTCTGAGGATGAAGAGAAGGTTCCTCCTGAAAAGACAATTGCATATGATGCTAAAGTAGCATCAGCAGAAACTGATTCCTTCCAAAATGACAAAGCAGCATCAGATGCAAGTGCCCCACCAGAGCTTAATTCTTCTCATCAGAAGCCTGAAATTGATGGTGAGCAGCGCAAACGATCTTTGAAAAGATTTGCCTCAGACCAACTAGAGGCAGAAGGAAAGAAATCTGTAAATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCCAAATTTGAAGAACTGAGTTCAATGGAGAATTCAGGTAGGACAAGCAGTTTGTCCCATCAAGATGCAGCAGTTGAATCACATGGAGATACCTCTTCTGTTGGCACAGGTACTGCATATAGATCAAAAGAGTTCTCCTGTGAGAATCCTGCTCCCAATCTTTCTAAGGTTGGTGGTTCTGAATGTGGTACTGAACTTTCTATTTCTTCTACTCTTGATTCACCTGACATATCAGAGGTTGGCGCAATGGAAAATGAGCGATATGCCAAAGATTTAGTAGAAGGGAATGGTAATCTTGAGAACACAATAATCCATAACGGTGAGGCCAATGTTCCATGTGCCATTCCAGCCTCTAACCTGTCTACCTCTGTTTTGGATCAGTCTGAGATTGTTGATGAGATCAGTGGAAATATGATTCACTCAGTGGTAGCTGTGGACTCTGAAGAACCTGTTATTGAGACTGAGAAAAATGCATCTGACCAACATAGAGAGCAGGCAGAGGCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCTCCCAGAAGCCATATAACTATCCCTGAATCACAAGGAACACCTTCAAGTCAGGTATCTACAAAACCTAAAGACAGCAAAATGAACAAGACTGGATCCCGCAATAAACGTGGTGCCCTATCAGTGGGCAGTAAATCACCTGCTAATACAAATCACGATTCAGGCTCAAGAGGCAGTAGGGAGCAACTGCCTAAAGGTCAGCGGAGTGGGAAGAGGCGCAATTCATTTGGCTCAGTAAAGCCTGATCACATTGATCAAGAACCTAGAGATGATAGTAGTAACAATAATTCTCTTCCCCGTTTCATGCAAGCTACAGAATCTGCTAAGGCCAAGATCAATGCAAATAACTCTCCAAAATCAATTCCAGATGTGCATGAACGAGACATCCAAGTAAAGAAGAGACACTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCACGCATCCAACATTCAATTTCTCAGGCGCAGCAGAATGCTAAGGGAAACAGTGTACATTCTCCTCAAGAGAGAAAATGGGTGAGGTGA 2307 0.4309 MGKSTSCFKLITCGGDAAEKDDYQVSEINDSNDKCGWSFRKKSARNRVLSNTVIAKVPSSANKETSECTSFNFQPLPEPNVVEKIYTTNCSDAKPQLSSFESSQISEIHVIETESKVDVSPPESTVIIIQAAIRGLLAQRELLLLQNVVKLQSAVRGHLVRRQAIGTLRCVQAIMKMQVLLRARRAQQLRPENHLNSKDGKNDSSEALGNENHMIKSNLRHTSIEKLLSNSFARQLLESTPKNKLIHFKCDPSKADSAWKWLERWMSVSSKDIAEDKKTSSLAEQSDESKDRTSVFQFETGIPSEVFLESTNSKPTVGDSPLLSEDEEKVPPEKTIAYDAKVASAETDSFQNDKAASDASAPPELNSSHQKPEIDGEQRKRSLKRFASDQLEAEGKKSVNGSRKVSNPAFIAAQSKFEELSSMENSGRTSSLSHQDAAVESHGDTSSVGTGTAYRSKEFSCENPAPNLSKVGGSECGTELSISSTLDSPDISEVGAMENERYAKDLVEGNGNLENTIIHNGEANVPCAIPASNLSTSVLDQSEIVDEISGNMIHSVVAVDSEEPVIETEKNASDQHREQAEAVLQDLRSSPEASPRSHITIPESQGTPSSQVSTKPKDSKMNKTGSRNKRGALSVGSKSPANTNHDSGSRGSREQLPKGQRSGKRRNSFGSVKPDHIDQEPRDDSSNNNSLPRFMQATESAKAKINANNSPKSIPDVHERDIQVKKRHSLPGATGRQVSPRIQHSISQAQQNAKGNSVHSPQERKWVR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00202 768 MobiDBLite consensus disorder prediction 564 583 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 421 451 - -
Gabi704g00202 768 ProSiteProfiles IQ motif profile. 144 173 IPR000048 GO:0005515
Gabi704g00202 768 MobiDBLite consensus disorder prediction 736 759 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 273 294 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 564 768 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 346 403 - -
Gabi704g00202 768 PANTHER IQ-DOMAIN 5-RELATED 1 738 - -
Gabi704g00202 768 SMART iq_5 144 165 IPR000048 GO:0005515
Gabi704g00202 768 SMART iq_5 121 143 IPR000048 GO:0005515
Gabi704g00202 768 MobiDBLite consensus disorder prediction 668 683 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 307 332 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 626 667 - -
Gabi704g00202 768 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Gabi704g00202 768 MobiDBLite consensus disorder prediction 370 399 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 684 713 - -
Gabi704g00202 768 Pfam IQ calmodulin-binding motif 126 142 IPR000048 GO:0005515
Gabi704g00202 768 Pfam IQ calmodulin-binding motif 147 163 IPR000048 GO:0005515
Gabi704g00202 768 MobiDBLite consensus disorder prediction 273 295 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 590 619 - -
Gabi704g00202 768 Pfam Protein of unknown function (DUF4005) 674 750 IPR025064 -
Gabi704g00202 768 Gene3D - 122 170 - -
Gabi704g00202 768 MobiDBLite consensus disorder prediction 346 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00202 Gabi-Chr704 1628781 1634615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00202 101 768 IQD Protein Family AT1G19870 39.099 1.20e-105 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00202 - - gmx:100799424 1132.09