Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00201 ATGGGTAAATCTACCTCATGCTTCAAACTAATCACATGCGGCGGTGATGCGGCGGAGAAGGATGATTACCAAGTATCTGAGATCAATGATTCCAATGATAAATGTGGCTGGAGTTTCCGCAAGAAATCTGCAAGGAACCGTGTGCTTAGCAATACTGTTATAGCAAAGGTTCCATCTTCTGCAAATAAGGAGACTTCAGAATGTACTAGTTTTAATTTTCAACCACTTCCCGAGCCTAATGTTGTCGAGAAGATTTACACAACAAATTGCTCTGATGCGAAGCCCCAGTTATCCTCCTTTGAAAGCTCACAAATTTCTGAAATACATGTCATTGAAACTGAGAGTAAGGTGGATGTCAGTCCACCAGAGTCTACTGTTATCATCATCCAGGCTGCCATCAGAGGGTTATTGGCTCAGAGAGAACTGCTACTGCTTCAGAATGTAGTGAAGTTGCAATCTGCTGTTCGTGGGCACTTGGTCCGGAGGCAAGCCATAGGAACTCTGCGTTGTGTTCAGGCCATCATGAAAATGCAGGTCCTTTTAAGAGCTCGCCGTGCTCAGCAGTTGCGTCCGGAAAATCATTTAAATTCCAAGGATGGCAAAAATGATTCCTCAGAAGCTTTGGGGAATGAAAATCACATGATCAAATCAAATCTGAGGCACACTTCCATTGAGAAGCTGCTTAGCAATAGTTTTGCTCGTCAGCTGTTGGAATCAACACCAAAGAACAAACTTATCCATTTCAAGTGCGATCCTTCTAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGGTGGATGTCTGTATCATCTAAAGATATTGCAGAGGACAAGAAAACTAGTTCTCTGGCAGAGCAATCAGATGAAAGCAAAGACAGAACTTCTGTGTTTCAATTTGAAACAGGTATTCCATCTGAAGTTTTTCTCGAGTCAACTAACTCAAAGCCCACTGTTGGGGATTCGCCTCTGCTTTCTGAGGATGAAGAGAAGGTGATTACTTATGATGCTAATAACTTCAAGTTTCAAGCAAGCTGCTCCTCATCATCTATTGTAAAAGATGACTTGGATCAGGTTCCTCCTGAAAAGACAATTGCATATGATGCTAAAGTAGCATCAGCAGAAACTGATTCCTTCCAAAATGACAAAGCAGCATCAGATGCAAGTGCCCCACCAGAGCTTAATTCTTCTCATCAGAAGCCTGAAATTGATGGTGAGCAGCGCAAACGATCTTTGAAAAGATTTGCCTCAGACCAACTAGAGGCAGAAGGAAAGAAATCTGTAAATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCCAAATTTGAAGAACTGAGTTCAATGGAGAATTCAGGTAGGACAAGCAGTTTGTCCCATCAAGATGCAGCAGTTGAATCACATGGAGATACCTCTTCTGTTGGCACAGGTACTGCATATAGATCAAAAGAGTTCTCCTGTGAGAATCCTGCTCCCAATCTTTCTAAGGTTGGTGGTTCTGAATGTGGTACTGAACTTTCTATTTCTTCTACTCTTGATTCACCTGACATATCAGAGGTTGGCGCAATGGAAAATGAGCGATATGCCAAAGATTTAGTAGAAGGGAATGGTAATCTTGAGAACACAATAATCCATAACGGTGAGGCCAATGTTCCATGTGCCATTCCAGCCTCTAACCTGTCTACCTCTGTTTTGGATCAGTCTGAGATTGTTGATGAGATCAGTGGAAATATGATTCACTCAGTGGTAGCTGTGGACTCTGAAGAACCTGTTATTGAGACTGAGAAAAATGCATCTGACCAACATAGAGAGCAGGCAGAGGCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCTCCCAGAAGCCATATAACTATCCCTGAATCACAAGGAACACCTTCAAGTCAGGTATCTACAAAACCTAAAGACAGCAAAATGAACAAGACTGGATCCCGCAATAAACGTGGTGCCCTATCAGTGGGCAGTAAATCACCTGCTAATACAAATCACGATTCAGGCTCAAGAGGCAGTAGGGAGCAACTGCCTAAAGGTCAGCGGAGTGGGAAGAGGCGCAATTCATTTGGCTCAGTAAAGCCTGATCACATTGATCAAGAACCTAGAGATGATAGTAGTAACAATAATTCTCTTCCCCGTTTCATGCAAGCTACAGAATCTGCTAAGGCCAAGATCAATGCAAATAACTCTCCAAAATCAATTCCAGATGTGCATGAACGAGACATCCAAGTAAAGAAGAGACACTCCTTACCTGGTGCCACTGGTAGGCAGGTTTCTCCACGCATCCAACATTCAATTTCTCAGGCGCAGCAGAATGCTAAGGGAAACAGTGTACATTCTCCTCAAGAGAGAAAATGGGTGAGGTGA 2388 0.4284 MGKSTSCFKLITCGGDAAEKDDYQVSEINDSNDKCGWSFRKKSARNRVLSNTVIAKVPSSANKETSECTSFNFQPLPEPNVVEKIYTTNCSDAKPQLSSFESSQISEIHVIETESKVDVSPPESTVIIIQAAIRGLLAQRELLLLQNVVKLQSAVRGHLVRRQAIGTLRCVQAIMKMQVLLRARRAQQLRPENHLNSKDGKNDSSEALGNENHMIKSNLRHTSIEKLLSNSFARQLLESTPKNKLIHFKCDPSKADSAWKWLERWMSVSSKDIAEDKKTSSLAEQSDESKDRTSVFQFETGIPSEVFLESTNSKPTVGDSPLLSEDEEKVITYDANNFKFQASCSSSSIVKDDLDQVPPEKTIAYDAKVASAETDSFQNDKAASDASAPPELNSSHQKPEIDGEQRKRSLKRFASDQLEAEGKKSVNGSRKVSNPAFIAAQSKFEELSSMENSGRTSSLSHQDAAVESHGDTSSVGTGTAYRSKEFSCENPAPNLSKVGGSECGTELSISSTLDSPDISEVGAMENERYAKDLVEGNGNLENTIIHNGEANVPCAIPASNLSTSVLDQSEIVDEISGNMIHSVVAVDSEEPVIETEKNASDQHREQAEAVLQDLRSSPEASPRSHITIPESQGTPSSQVSTKPKDSKMNKTGSRNKRGALSVGSKSPANTNHDSGSRGSREQLPKGQRSGKRRNSFGSVKPDHIDQEPRDDSSNNNSLPRFMQATESAKAKINANNSPKSIPDVHERDIQVKKRHSLPGATGRQVSPRIQHSISQAQQNAKGNSVHSPQERKWVR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00201 795 Pfam Protein of unknown function (DUF4005) 701 777 IPR025064 -
Gabi704g00201 795 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 375 394 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 617 646 - -
Gabi704g00201 795 Pfam IQ calmodulin-binding motif 126 142 IPR000048 GO:0005515
Gabi704g00201 795 Pfam IQ calmodulin-binding motif 147 163 IPR000048 GO:0005515
Gabi704g00201 795 MobiDBLite consensus disorder prediction 695 710 - -
Gabi704g00201 795 ProSiteProfiles IQ motif profile. 144 173 IPR000048 GO:0005515
Gabi704g00201 795 MobiDBLite consensus disorder prediction 397 426 - -
Gabi704g00201 795 SMART iq_5 144 165 IPR000048 GO:0005515
Gabi704g00201 795 SMART iq_5 121 143 IPR000048 GO:0005515
Gabi704g00201 795 MobiDBLite consensus disorder prediction 591 610 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 711 740 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 375 430 - -
Gabi704g00201 795 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Gabi704g00201 795 Gene3D - 122 173 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 591 795 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 763 786 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 653 694 - -
Gabi704g00201 795 MobiDBLite consensus disorder prediction 448 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00201 Gabi-Chr704 1628781 1634615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00201 101 795 IQD Protein Family AT1G19870 38.289 3.31e-105 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00201 - - gmx:100799424 1188.33