Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00197 ATGGAAGGTGTTGACCAAAATGGTATGCATCGAACCAGTTATGCATTTGGTCCTCAAGTACCAAGACCACCAAACCAGAAACTTGGTATACCACCCTCCCACCCAAATGTTAATATCCCTCATTCAACTCCTTATGCCCAATTTTCGGGGTCATCTTCTCAGCGATTGCGTTCTCCGGGTTCTTCCCATTCAAGGTCTTTGTCTCAACCATCAATTTTCTCGCTGGATTCCTTGCCCCCATTGAGTCCTTCACCAGCTACTACCTCCTTTTATGACTCGATTTCGACAACAGATATGTCTGTGGAGGAAAGTTTGGTTTCCTCTCAAGCTCCTTCCAATGGCGGTCATGTGCTTCAGGGTGGTCATAGACTTCCTCCTCGTAAAGGACATAGGCGCTCGAGCAGTGATTCCCCTTTGGGAATCTCTGGTTTTATGCAATCTTCTCCTCCTCCATTGGTTCCTCCCCGAGGAGAAAGCTCTGGTTTTGAGAAGCCAATCCAGTTAGTGTTAAAGGGGTCAATTAAGGATGAGGACCGTATTGACGAGGCTATGAATGAGAGGAAAGAGGAAGGTGCGGATGATTTGTTTAGTGAATTCATGAATTTGGACAACATTGATAATCTGAACTTTTCTGGGATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCAAAGACAGTAGAAAGCAGTGATACTGAAGTTGAGAGTCATGCAAATGGGAAAACAAGTGGTAGTCAGGGGGCAAGTTCAAGCTGGTTTGAGGAAAGAAGGGAAGGAATCAAGAGGAGTTCAGATGGGGACATTGCACCAGGTGCCCGGCACCGGAGAAGTTTCTCATTGGATAGTTCCATAGGAAACTTTCATATTGAGGATGGATCTCCTAAGCTTCCCCTTTTGAAAAATCAAGTTGGTCAACACTCACCTAGCAATTCAATAGATGGTAAAACATCTGAAACCACCCTGGATTATGGAAATGGTGAATTCAATGTAGAGGAGCTGAAGAAAATAATGGAAAGTGATAAACTTGCTGAAATTGCCTTCTCTGATCCCAAGCGTGCAAAAAGAATTTTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGAGGAAGATGCTATACATTACTGAATTGGAGCATAAAGTGCAAACCCTTCAGACAGAGACAACCACATTATCTACTCAGTTTACCAAATTACAGAGGGATAACACTGAGCTTAAAAATGAGAACAACCAGTACAAATTAAGGCTTCAAGCGATGGAACAACAGTCTCATTTGAAAGATGCTCTGAAGGAGACCTTGGATGCTGAAGTACGGCGATTGAGGCTTGCAGTTGCAGAACTTGGTGGGGAATCCCTCACGAGTTGCATGGCTCGACAACTTGCTATTAACCAGTTACAGCATCAGCAACTCGGCCAGCAGCATAGACATTTTATACCTCAAAATCGCCATACTCATGGAGAGACAGAGTCTCAAGGCAATGAATTGCATCCTCAGACTCAGTCACAGCAGATTCAACGCAATGAATTGCATCCCCAACCTTAA 1545 0.4408 MEGVDQNGMHRTSYAFGPQVPRPPNQKLGIPPSHPNVNIPHSTPYAQFSGSSSQRLRSPGSSHSRSLSQPSIFSLDSLPPLSPSPATTSFYDSISTTDMSVEESLVSSQAPSNGGHVLQGGHRLPPRKGHRRSSSDSPLGISGFMQSSPPPLVPPRGESSGFEKPIQLVLKGSIKDEDRIDEAMNERKEEGADDLFSEFMNLDNIDNLNFSGMEDKDLDSRTSGSKTVESSDTEVESHANGKTSGSQGASSSWFEERREGIKRSSDGDIAPGARHRRSFSLDSSIGNFHIEDGSPKLPLLKNQVGQHSPSNSIDGKTSETTLDYGNGEFNVEELKKIMESDKLAEIAFSDPKRAKRILANRQSAARSKERKMLYITELEHKVQTLQTETTTLSTQFTKLQRDNTELKNENNQYKLRLQAMEQQSHLKDALKETLDAEVRRLRLAVAELGGESLTSCMARQLAINQLQHQQLGQQHRHFIPQNRHTHGETESQGNELHPQTQSQQIQRNELHPQP 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00197 514 CDD bZIP_plant_RF2 353 423 IPR044759 GO:0003700|GO:0006355
Gabi704g00197 514 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 350 413 IPR004827 GO:0003700|GO:0006355
Gabi704g00197 514 MobiDBLite consensus disorder prediction 492 514 - -
Gabi704g00197 514 MobiDBLite consensus disorder prediction 237 253 - -
Gabi704g00197 514 SUPERFAMILY Leucine zipper domain 352 408 IPR046347 GO:0003700|GO:0006355
Gabi704g00197 514 SMART brlzneu 348 412 IPR004827 GO:0003700|GO:0006355
Gabi704g00197 514 MobiDBLite consensus disorder prediction 207 274 - -
Gabi704g00197 514 MobiDBLite consensus disorder prediction 39 115 - -
Gabi704g00197 514 MobiDBLite consensus disorder prediction 170 195 - -
Gabi704g00197 514 MobiDBLite consensus disorder prediction 484 514 - -
Gabi704g00197 514 Pfam bZIP transcription factor 352 410 IPR004827 GO:0003700|GO:0006355
Gabi704g00197 514 Coils Coil 396 423 - -
Gabi704g00197 514 FunFam probable transcription factor PosF21 351 404 - -
Gabi704g00197 514 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 62 504 - -
Gabi704g00197 514 Gene3D - 351 434 - -
Gabi704g00197 514 MobiDBLite consensus disorder prediction 1 195 - -
Gabi704g00197 514 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00197 Gabi-Chr704 1593599 1597419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00197 17 447 bZIP Transcription Factor Family AT4G38900 46.581 5.82e-106 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi704g00197 bZIP_1 3.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00197 - - gmx:100779731 711.835