Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00196 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCATAAAGCAGATCAATATAAAACTGCTCAGGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAAATTATGGCAATTATGGCTGAAAGAGATGCGGCTATTCAAGAAAGAAATCTGGCCCTTTCTGAGAAAAAGACAGCACTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATACTGCAATTGCAGAGCGAAATAATGCAATTATGGAACGAGATAATGCGATTGCAGCTCTTCAGTATCGAGAAAACACGTTAACTAGTGGTAGTATGTCATCGTGTCCTCCAGGATGCCAAATTTCACGTGGTGTCAAGCATATTCATCATCCTCAGCAACAGGTACACCATTTACCTAACATGGTTGATGCTTCTTACAGCACACGGGAAAGGCACCCAGCAGATGCCCTTCCATCCGCACCCATCCCTTCAGAAGTTGGGAAATCACGGCGGGCCAAACGACCAAAGGAAGCTAAGTCGATTTCACCTAATAAAAAGACTTCGAAAGCAGCAAAAAAAGTCAAGAGGGAGAATGAAGACTTGAATAAGATGATGTTTGGCGAGGCACATGAGTGGAAGAGTGGTCAGGAAATGGTCAACGGAGGTGATGATCTTAACAAGCAGTTAGTGGTGTCGAAGGCGGATTGGAAAGGTCAGGACTTGGGGTTGAACCAAGTGGCATATGATGAGTCAACCATGCCAGCGCCAGTATGCTCTTGTACTGGTGTACTGAGGCAGTGCTACAAATGGGGGAATGGGGGTTGGCAGTCTGCCTGTTGCACAACAACGCTGTCAATGTATCCACTTCCAGCAGTGCCCAACAAGAGGCATGCTCGGGTAGGTGGTCGAAAGATGAGTGGGAGTGCTTTCAATAAACTGCTTAGTCGGCTTGCAGCCGAAGGTCATGATCTGTCAAACCCCGTTGACCTCAAGGACCATTGGGCCAAACATGGTACAAATCGGTACATCACAATAAAGTAA 1014 0.4694 MDDAGHRENGRHKADQYKTAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKTALAERDMAFLQRDTAIAERNNAIMERDNAIAALQYRENTLTSGSMSSCPPGCQISRGVKHIHHPQQQVHHLPNMVDASYSTRERHPADALPSAPIPSEVGKSRRAKRPKEAKSISPNKKTSKAAKKVKRENEDLNKMMFGEAHEWKSGQEMVNGGDDLNKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00196 337 PANTHER - 1 337 IPR010409 -
Gabi704g00196 337 MobiDBLite consensus disorder prediction 1 15 - -
Gabi704g00196 337 MobiDBLite consensus disorder prediction 1 20 - -
Gabi704g00196 337 SMART GAGA_bind_2 1 337 IPR010409 -
Gabi704g00196 337 MobiDBLite consensus disorder prediction 158 174 - -
Gabi704g00196 337 MobiDBLite consensus disorder prediction 137 188 - -
Gabi704g00196 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Gabi704g00196 337 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00196 Gabi-Chr704 1581457 1585226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00196 65 337 BBR or BPC Transcription factor family AT5G42520 65.172 2.19e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gabi704g00196 GAGA_bind 6.1e-109 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00196 - - gmx:100783502 636.721