Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00181 ATGGCAACAACGGCTATATTTCTGAGCTTCATGGCAGTGACGTGCTTAACCTTAACGTGTGCCCAGAACAACGCGACTCAATCGGAGATCGAAGCCTTAATAGCCTTCAAGATCAACCTTGAAGACCCTCTTGGTTCCTTGGACGGCTGGGATCCATCCACGCCATTCGCTCCCTGTGATTGGCGCGGCATTCTCTGTTTCAACAACCGAGTTCGCCAACTTCGCTTGCCTCGTCTTCAACTCAGTGGTCGACTCGCTCCTTCACTCTCCGACCTTCAACAACTTCGCAAGCTAAGTCTTCACTCCAACAACTTCAATTCCTCTCTCCCTCACTCTCTCTCACATTGCTCCTTCCTCCGCGCCCTTTACCTTCACAACAACAAACTCTCCGGCAACCTTCCGCCGGCGATTCTCAACCTCACCAACCTTCAGATTCTCAACGTCGCTCACAACCTTCTCTCCGGCACCGTCCCCGGTCACCTCTCAAACTCCCTCCGGTTCCTCGATTTATCGTCGAATGCATTCTCCGGTGACATTCCGGGGAATTTCACTTCGAAATCTCAGCTTCAGCTCATCAACTTGTCCTACAATGGCTTCACCGGCGGAATACCGGTGACAATAGGAGCATTGCAAAATCTGGAGTATCTTTGGGTAGACTTCAACAAAATACAAGGGACCTTGCCTTCTGCAATTGCTAACTGTTCCTCATTGGTGCATGTGAGCGCAGAGGGTAATGCAATCAGTGGGTTGATACCTTCCACCATGGGGATGATGCCAAAGCTTCAAGTGCTGTCACTGTCGCTGAATCAACTTTCTGGTTCGGTCCCCACGTCCTTGTTTTGCAATGTACATTCGACTAACAACAACAACACTTGGTCTCTGAGAATCGTTCAGCTTGGCTTTAATAAGCTCACGGGCATTTCCAAGCCGCAAAGTGGGAACTGCGTTAGCATTTTGGAGTTTTTGGACCTTAAGGAGAATCACATTACTCACGCTCCGTTTCCGTCTTGGTTGACCAATGCGACGTCGTTAAGGGCTCTTGATCTTTCGGGAAACTCATTTTCAGGTATTCTTCCTGTTGATATTGGGAATCTTGTGAGGTTAGAAGAACTGAGAGTGGCAAATAATTCATTATCCGGTGTGGTCCCCAGTAGCATTGTGAATTGCAGGTTGTTGTGGGTTCTTGATCTTCAGGGTAACCGGTTATCTGGTCCTATTCCTTCGTTTCTCGGGCAACTGAGGAACCTAAAGGAGTTATCTCTTGGTGGTAACCTTTTTACTGGTTCAATACCAACGAGCTATGGAACACTTTCTTCCCTGGAGACTCTGAATTTAAGCAACAATAAATTAACAGGGAATGTGCCCCTTGAGATCATGCAATTAGGCAACGTGAGTGCTTTGAATCTCAGCAACAACAGATTTTCGGGCCAAGTTTCATCTAACATTGGGAACTTGACAGCTTTGCAGGTTCTTAATTTGAGTCACTGTGGGTTTTCAGGAAGGATTCCTGATACTCTGGGCAATTTGATGAAACTAACAGTGTTGGATTTGAGCAAGCAAAACCTTTCGGGCGAATTGCCTATTCAGCTTTTTGGATTACCAAGCCTGCAAGTTGTGGCACTTGAGGAAAACAATTTGAGTGGTGCTCTTCCTGAGGGCTTCAGCAGCATAGTTAGTCTACTGTATCTTAATCTCACTTCCAATGCCTTTGTTGGCCACATTCCACCAACCTATGGATTTCTTAGTTCCTTAATTGTTCTCTCTTTGTCTCACAATAGCATCTCTGGAACAATACCGCGAGAGATTGGTGGTTGTTCTCAACTAGAAGTGCTCCAGCTGCAGTCAAATCGTTTGAAGGGTGATATCCCAGATGAAATATCACAATGTTCCGCTTTGACTTCAATCGAGTTGGATGGTAATCAATTGACGGGTCATATACCAGAATCCTTGTCTAAATTATCAAAGTTGACAGTGTTGAGTCTATCTTCAAATCTATTGACCGGGGAAATTCCAGTTAACCTTTCACGCATTCCTGGTTTGAAGCATTTAAATCTCTCCAGTAATAATCTCGAGGGTGAGATTCCAGAAATGCTTGGTTCTCGATTCAATGACCCTTCTGTGTTTGGAAAGAACCAGAGGCTATGCGGAAAACCTTTGCATAGAGAATGTGCAAATGTAAGAAGGCGAAAGAGGAGAAGGCTAATAATCTTCATAGGGGTGGCTGTGGTTGGACTCTGTCTTTTGGCATTGTGTTGTTGTGGCTATGTTTACAGCCTCTTCAGGTGGCGCAATAAGCTTCGAGAAGGGGTAACGGGTGAGAAGAAACGTAGCCCTGCTACAAGTGGTGCAAGCAGAGGGAGTGGGGAAAATGGGGGCCCAAAACTAGTAATGTTCAACAACAAGATCACTTATGCTGAGACATTAGAAGCAACCAGAAACTTTGATGAAGAAAATGTGTTGAGTAGGGGAAGATATGGCCTTGTGTTCAAAGCCTCCTTCAATGATGGGATGGTTCTCTCAATTCGTCGCCTTTTTGCGGGATTCATGAATGAGGGTACCTTCCGTAAAGAAGCGGAATCACTTGGCAAAGTGAAGCATCGTAATTTAACAGTTTTGCGTGGTTATTATGCAGGACCACCTGATGTAAGGCTTCTTGTTTATGACTACATGCCCAATGGGAACTTAGGGACACTTCTTCAAGAGGCATCTCAGCAAGATGGCCATGTATTGAATTGGCCAATGCGTCATCTCATTGCACTAGGCATTGCTCGAGGTCTAGAATTCTTGCACTCAGTGCCAATAGTTCACGGTGACGTGAAGCCTCAGAATGTTCTCTTTGATGCAGATTTTGAAGCCCATTTGTCAGAATTTGGGTTGGAACGGTTAACAATAGCAGCAACCCAAACAGAAGCATCCTCATCATCCACCCCAGTTGGTTCCTTAGGCTATGTATCACCAGAAGCTGCATTAACTGGGCAAGCCACAAAGGAAGCTGATGTATACAGCTTTGGGATTGTATTGTTGGAGATACTAACAGGGAGGAAACCAGTGATGTTCACGGAAGATGAAGACATAGTGAAGTGGGTGAAGAGGCAATTACAAAAGGGTCAAATTTCAGAGCTGTTAGAGCCTGGTTTGCTTGAGCTTGATCCAGAGTCATCAGAATGGGAAGAGTTTTTGTTAGGTATCAAAGTAGGTCTTTTATGCACAGCACCTGATCCTCTTGATCGACCATCTATGACTGATGTTGTTTTCATGCTACAAGGTTGCCGGGTCGGACCGGAGATCCCATCCTCAGCTGATCCCACAACACTACCTTCCCCTGCTTGA 3330 0.4565 MATTAIFLSFMAVTCLTLTCAQNNATQSEIEALIAFKINLEDPLGSLDGWDPSTPFAPCDWRGILCFNNRVRQLRLPRLQLSGRLAPSLSDLQQLRKLSLHSNNFNSSLPHSLSHCSFLRALYLHNNKLSGNLPPAILNLTNLQILNVAHNLLSGTVPGHLSNSLRFLDLSSNAFSGDIPGNFTSKSQLQLINLSYNGFTGGIPVTIGALQNLEYLWVDFNKIQGTLPSAIANCSSLVHVSAEGNAISGLIPSTMGMMPKLQVLSLSLNQLSGSVPTSLFCNVHSTNNNNTWSLRIVQLGFNKLTGISKPQSGNCVSILEFLDLKENHITHAPFPSWLTNATSLRALDLSGNSFSGILPVDIGNLVRLEELRVANNSLSGVVPSSIVNCRLLWVLDLQGNRLSGPIPSFLGQLRNLKELSLGGNLFTGSIPTSYGTLSSLETLNLSNNKLTGNVPLEIMQLGNVSALNLSNNRFSGQVSSNIGNLTALQVLNLSHCGFSGRIPDTLGNLMKLTVLDLSKQNLSGELPIQLFGLPSLQVVALEENNLSGALPEGFSSIVSLLYLNLTSNAFVGHIPPTYGFLSSLIVLSLSHNSISGTIPREIGGCSQLEVLQLQSNRLKGDIPDEISQCSALTSIELDGNQLTGHIPESLSKLSKLTVLSLSSNLLTGEIPVNLSRIPGLKHLNLSSNNLEGEIPEMLGSRFNDPSVFGKNQRLCGKPLHRECANVRRRKRRRLIIFIGVAVVGLCLLALCCCGYVYSLFRWRNKLREGVTGEKKRSPATSGASRGSGENGGPKLVMFNNKITYAETLEATRNFDEENVLSRGRYGLVFKASFNDGMVLSIRRLFAGFMNEGTFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLEFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLERLTIAATQTEASSSSTPVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTEDEDIVKWVKRQLQKGQISELLEPGLLELDPESSEWEEFLLGIKVGLLCTAPDPLDRPSMTDVVFMLQGCRVGPEIPSSADPTTLPSPA 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00181 1109 Pfam Leucine rich repeat 580 618 IPR001611 GO:0005515
Gabi704g00181 1109 Pfam Leucine rich repeat 414 474 IPR001611 GO:0005515
Gabi704g00181 1109 Pfam Leucine rich repeat 343 402 IPR001611 GO:0005515
Gabi704g00181 1109 Pfam Leucine rich repeat 631 690 IPR001611 GO:0005515
Gabi704g00181 1109 Pfam Leucine rich repeat 511 569 IPR001611 GO:0005515
Gabi704g00181 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Gabi704g00181 1109 SUPERFAMILY L domain-like 28 359 - -
Gabi704g00181 1109 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 185 - -
Gabi704g00181 1109 SUPERFAMILY Protein kinase-like (PK-like) 793 1098 IPR011009 -
Gabi704g00181 1109 ProSiteProfiles Protein kinase domain profile. 814 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00181 1109 Gene3D Ribonuclease Inhibitor 463 726 IPR032675 -
Gabi704g00181 1109 ProSiteProfiles Leucine-rich repeat profile. 439 460 IPR001611 GO:0005515
Gabi704g00181 1109 Pfam Leucine Rich Repeat 488 509 IPR001611 GO:0005515
Gabi704g00181 1109 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 333 1087 - -
Gabi704g00181 1109 SMART serkin_6 814 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00181 1109 SMART LRR_typ_2 677 701 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 533 556 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 316 340 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 365 388 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 413 436 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 653 676 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 485 509 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 258 282 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 581 605 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 92 116 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 437 461 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 210 234 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 606 629 IPR003591 -
Gabi704g00181 1109 SMART LRR_typ_2 140 164 IPR003591 -
Gabi704g00181 1109 FunFam Piriformospora indica-insensitive protein 2 358 455 - -
Gabi704g00181 1109 MobiDBLite consensus disorder prediction 771 794 - -
Gabi704g00181 1109 SUPERFAMILY L domain-like 352 695 - -
Gabi704g00181 1109 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Gabi704g00181 1109 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Gabi704g00181 1109 Gene3D Ribonuclease Inhibitor 281 462 IPR032675 -
Gabi704g00181 1109 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 890 1095 - -
Gabi704g00181 1109 PRINTS Leucine-rich repeat signature 437 450 - -
Gabi704g00181 1109 PRINTS Leucine-rich repeat signature 344 357 - -
Gabi704g00181 1109 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 204 307 - -
Gabi704g00181 1109 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Gabi704g00181 1109 Gene3D Transferase(Phosphotransferase) domain 1 890 1095 - -
Gabi704g00181 1109 Gene3D Phosphorylase Kinase; domain 1 789 889 - -
Gabi704g00181 1109 Pfam Protein kinase domain 816 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00181 1109 FunFam Putative LRR receptor-like serine/threonine-protein kinase 779 889 - -
Gabi704g00181 1109 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 459 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00181 Gabi-Chr704 1487772 1491101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00181 1 1109 Receptor kinase-like Gene Family AT1G75640 63.541 0.0 1348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Gabi704g00181 Pkinase 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00181 - - gmx:100784917 1632.85