Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00177 ATGAAGATCCAGTGCGACGTGTGTAACAAACACGAGGCTTCGTTTTTCTGCACCGCCGACGAAGCTGCTCTATGCGACGGCTGCGACCACCGTGTCCACTATGCTAACAAGCTCGCCTCCAAACATGAACGTTTCTCTCTCAGCCATCCTTCTGCAAAGCACAACCCAGTCTGCGATGTTTGCCACGAGAAAAGAGCTTTTGTCTTTTGTCAGCAAGATAGAGCGATTCTGTGCAAAGAGTGTGACTTTCCGATTCATTCTTCCAACGAGCACACAAAGAAACATAATAGGTTTCTTCTCAGTGGGATTAAGCTCTCTGATTCTACAACGCTTCATTCATCATCGCCACATAATTCTATGGACAATTCAAAAGCATCATCGTCTTCTACAAATGAAGAAGCTGGTTTCACAAGCAGCATATCCGAGTACTTGATTAATACTATACCGGGTTGGCAGTTCGAAGATTTCCTCGATTCATCATCACCTTCTGTTCCGTTTGATTTCTCCAAGAATGGTTATGATGATGATATGTTGCCACTTCCTGGTGGTGCTGGTAATGAGAGAAATATGGGTGGGATCTGGGTTCCTCAAGCACCATCTTATGTATATTCTGCACAAATGGATCAGCAGAATATCGGGTATAGAGAGACAAAGGAAACCACCAATAACATCAAAGGCAGCAGATCAAGGTTGCGGGATGATACTTTCATAGTACCACAGATAAGCAATCTCAAAGTTGCCTCCAACAAAAGATCCAGACTTCTATGGTAG 771 0.4397 MKIQCDVCNKHEASFFCTADEAALCDGCDHRVHYANKLASKHERFSLSHPSAKHNPVCDVCHEKRAFVFCQQDRAILCKECDFPIHSSNEHTKKHNRFLLSGIKLSDSTTLHSSSPHNSMDNSKASSSSTNEEAGFTSSISEYLINTIPGWQFEDFLDSSSPSVPFDFSKNGYDDDMLPLPGGAGNERNMGGIWVPQAPSYVYSAQMDQQNIGYRETKETTNNIKGSRSRLRDDTFIVPQISNLKVASNKRSRLLW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00177 256 CDD Bbox1_BBX-like 5 47 - -
Gabi704g00177 256 CDD Bbox1_BBX-like 57 100 - -
Gabi704g00177 256 MobiDBLite consensus disorder prediction 110 132 - -
Gabi704g00177 256 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Gabi704g00177 256 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Gabi704g00177 256 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 243 - -
Gabi704g00177 256 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gabi704g00177 256 FunFam B-box zinc finger protein 21 1 98 - -
Gabi704g00177 256 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Gabi704g00177 256 SMART bboxneu5 4 47 IPR000315 GO:0008270
Gabi704g00177 256 SMART bboxneu5 53 100 IPR000315 GO:0008270
Gabi704g00177 256 Gene3D Classic Zinc Finger 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00177 Gabi-Chr704 1431033 1432016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00177 1 256 C2C2-CO-like Transcription Factor Family AT1G75540 40.541 1.90e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Gabi704g00177 zf-B_box 2.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00177 - - gmx:100785978 290.426