Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00173 ATGGCTGGGTTCATCTCTCTAGGTGGAAGGGGAGGCCCACAAAACAAGGAAGGAGAAGGAGAAAAAGAAGATAATATCAACAATAGCCTATTCTTGTTCAGGAACGAGGAGATCTACAACAAGGGGCTCGAGATATGGCCGCAGTCATATCACCCACACGAAAACTCCAACTACTACTCGTTTGGGGTGGGTCCTAGTCGCAGGAACTCCTCCTCCAACGTTAACGTTAACGTTAACGTTAACGACGACGACGTTTCCTTCGGTGTCTCTGATGAGTCTACGAGGTTTGGATTAACGGTCATGAGGTCTGGAAGTGGCATCAACTGTCAGGACTGTGGGAACCAAGCTAAGAAAGACTGTTCACATCTCAGATGCAGAACTTGCTGTAAAAGTCGAGGGTTTCAGTGTCGTACACACGTCAAGAGCACTTGGGTTCCCGCAGCCAAACGCCGTGAACGACAGCAACAACTCGCTGCGTTGCAGCACCAACAACAATTGCATAGAGACAATCAAGGTGCGGCCTCTCTTGCCTGCGCTCCACCACCCATCACTAACACAGGGTTGGAGCTGAGACAATTCCCACCCGAAGTGAACTCTTCAGCGGTGTTTCGGTGTGTGAGAGTTAACGCAGTGGACACTCATGATGAGCAGTGGGCATATCAAACAGCTGTCAACATCGGAGGGCATGTTTTCAAGGGAATTCTCTATGATCAAGGAGCCGAAGCTCCTTACATTAGTACAGGCACAAATGCCGAGGGTTCCTCCGGTGAAGGTGAAGCTCAACAACTTAGTCTCATAACCGCTGCAACAACCAGCGGGAACCCATTTGACCCTACACTTTACTCCGCTCCGCTGAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGACCCTAA 903 0.5006 MAGFISLGGRGGPQNKEGEGEKEDNINNSLFLFRNEEIYNKGLEIWPQSYHPHENSNYYSFGVGPSRRNSSSNVNVNVNVNDDDVSFGVSDESTRFGLTVMRSGSGINCQDCGNQAKKDCSHLRCRTCCKSRGFQCRTHVKSTWVPAAKRRERQQQLAALQHQQQLHRDNQGAASLACAPPPITNTGLELRQFPPEVNSSAVFRCVRVNAVDTHDEQWAYQTAVNIGGHVFKGILYDQGAEAPYISTGTNAEGSSGEGEAQQLSLITAATTSGNPFDPTLYSAPLNAFMAGTQFFPPPRP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00173 300 NCBIfam putative zinc finger domain, LRP1 type 108 150 IPR006510 -
Gabi704g00173 300 NCBIfam LRP1 C-terminal domain 192 239 IPR006511 -
Gabi704g00173 300 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 273 IPR007818 GO:0003700|GO:0006355
Gabi704g00173 300 MobiDBLite consensus disorder prediction 1 24 - -
Gabi704g00173 300 Pfam Domain of unknown function (DUF702) 106 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00173 Gabi-Chr704 1367415 1368792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00173 1 299 C2H2 Transcription Factor Family AT1G75520 44.011 3.92e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gabi704g00173 DUF702 3.7e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00173 - - gmx:100807290 369.007