Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00172 ATGGGGAATGAAGGTTGTTTTCTTCCCACGATGGACCTGCTACGATCGGAGCCTATGCAACTCGTTCAATTGATTATTCCAATCGAATCGGCTCATCGATCCATCTCTTACCTTGGCGATCTCGGTCTCTTCCAATTCAAAGATCTTAATGCAAAAAAAAGCCCATTCCAACGGACTTATGCTTCTCAGATTAAAAGATGTGGGGAGATGGCACGTACGCTGCGATTATTTAAGGAACAAATGACGAAGGCAGGTGTATCACCCTCAGCGCGGTCAACAAGAGACAGTGTTGTTGATCTGGAAAATTTGGAGATTAAACTTGCAGAACTTGAAGCCGAGCTACTCGAGATTAATGCAAATAATGAGAAGTTGCAACACACTTACAACGAGCTGTTGGAGTATAAGCTTGTTCTAGAGAAGGTTAGTGAGTTTTTCTCTTCAGCACAAAATAGTGCTGTAGCTCACCAGAGAGAGCTTGAAGTTAAGACAATTGTTGAAGGGTCTATTGACAGCCCATTGTTACTGGAACAAGAGACGCCAACACCGTTAAAGCAGATTAAGCTGGGATTTATCAGTGGTCTTGTTCCTAGAGAAAAATCAATTCCTTTTGAAAGAATTTTATTTCGTGCTACTAGAGGAAATGTGTTTCTCAAGCAAGATGCGGTTGAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTCATAAAAATGTATTTGTTGTCTTTTATTCTGGAGAGCGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGGGTAAACAATTTCAGATGATAGCAGAGGTGTCTGGAAAACTTTCAGAATTGAAGACTACAATTGATGTAGGATTGGTTCACAGGAGCACTCTGTTGCAGACAATTGGATATCATTATGAGCAGTGGAGCCTCCTGTTGAAGAAGGAAAAATCCATTTATCACACACTAAACATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGCTGGTGTCCTGTTTTTGCAACAAATCAGATTCAGAAAGTATTGCAGCGGGCAACAATGGACTGTATGTCTCAAGTTGGGGCGATATTTCAGGTTTTACAGACGAAGGAATCACCGCCTACCTATTTTTGCACTAACAAGTTTACTTCTTCCTTTCAAGAGATTGTAGATGCCTATGGAGTTTCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAATCATCACGTTTCCATTCCTTTTTGCTGTAATGTTTGGTGACTGGGGGCATGGCATATGCTTATTACTGGCGGCTTTGTATTTCATAATAAGAGAGAAAAAGTTTTCTTGTCAGAAACTTGGAGACATATTAGAAATGGCTTTTGGTGGACGCTATATTATTATGATGATGGCACTCTTCTCAATCTACACGGGATTGATATACAATGAATTCTTCTCTGTTCCATTTGAACTATTTGGACCATCTGCCTATGCATGCCGTGATCCTTCATGCAGGGATGCTTCTACAACAGGTTTAATAAAAGTGCGTGACACTTACCCATTTGGTCTGGATCCCAAATGGCATGGTACTCGGACTGAACTGCCATTTCTTAACTCTATGAAGATGAAGATGTCAATTCTACTGGGAGTATCACAGATGAATCTTGGAATCTTATTGAGTTACTATAATGCAAAATACTTTGGAAACAACATAAATATCTGGTACCAGTTTGTTCCCCAAATGATATTCTTAAACAGCCTGTTTGGCTACCTTTCACTCCTCATAGTTGTAAAATGGTGCACTGGATCACAGGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGGTGGCCAAAAATTCCTTCAACTTGCGTTACTACTGTTGGCACTTGTCGCAGTACCATGGATGTTGTTACCCAAGCCCTTTCTCCTGAAGAAGCAACATCAAGAAAGGCATCAAGGTCAATCTTACTCTTTGCTCCACAACACGGATGACCCTCTTGAATCAGAGTCACATAGTATTCCCCCTGACCATGAGGAATTTGAGTTCAGCGAGGTTTTCGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTGTCTAATACAGCTTCGTATCTACGTTTATGGGCCCTCAGTTTAGCTCATTCAGAGTTATCAAGTGTTTTTTATGACAAAGTTCTACTTCTGGCTTGGGGGTTTAACAACACCATTGTTCTAATTGTTGGCATTATAGTTTTTATATGTGCAACTGTTGGTGTGTTACTGGTAATGGAAACTCTAAGTGCTTTTTTGCATGCTTTGAGACTTCACTGGGTAGAATTTCAGAACAAATTTTATGAGGGAGACGGTTACAAGTTCTTCCCATTTTCATTTACATTACTTGCTGATGAGGATGAACTTTAG 2457 0.4013 MGNEGCFLPTMDLLRSEPMQLVQLIIPIESAHRSISYLGDLGLFQFKDLNAKKSPFQRTYASQIKRCGEMARTLRLFKEQMTKAGVSPSARSTRDSVVDLENLEIKLAELEAELLEINANNEKLQHTYNELLEYKLVLEKVSEFFSSAQNSAVAHQRELEVKTIVEGSIDSPLLLEQETPTPLKQIKLGFISGLVPREKSIPFERILFRATRGNVFLKQDAVEHPVLDPLSGEKVHKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMIAEVSGKLSELKTTIDVGLVHRSTLLQTIGYHYEQWSLLLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATNQIQKVLQRATMDCMSQVGAIFQVLQTKESPPTYFCTNKFTSSFQEIVDAYGVSKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLAALYFIIREKKFSCQKLGDILEMAFGGRYIIMMMALFSIYTGLIYNEFFSVPFELFGPSAYACRDPSCRDASTTGLIKVRDTYPFGLDPKWHGTRTELPFLNSMKMKMSILLGVSQMNLGILLSYYNAKYFGNNINIWYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFGGQKFLQLALLLLALVAVPWMLLPKPFLLKKQHQERHQGQSYSLLHNTDDPLESESHSIPPDHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIVGIIVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLADEDEL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00172 818 Coils Coil 93 127 - -
Gabi704g00172 818 PANTHER VACUOLAR PROTON ATPASES 13 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gabi704g00172 818 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gabi704g00172 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00172 Gabi-Chr704 1345068 1359152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00172 11 817 Primary Pumps ATPases(2) AT4G39080 74.381 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00172 K02154 - gmx:100805813 1396.33