Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00152 ATGTATCCCAACCAAGCCTTTTCTTCGGGGTCCTATGCAGAGATGTTGTCCGGGAGTTCTCTGTTACCTCATAACTATAGCGAATCTGTAGGAGGACAAAATGAGGTGAAGTTTTTCACAGCAATGGGTGACACAGTGACTATGCAGTCTATTGATGGGCATTCCAATACTGCAACTGGTGATCCAGCGTGCAACTCTTTTGCTGGAGATTCCCATGTTGTTGCAAGGACACAAATGGGAATTGTAGATAATGAGCAAAATATACAGTGTCAGGGCTTATCTCTTAGTCTCGGGACCCTCATGCCTTCTACTGCATCTGTCCCTTCGTTTCAATACCAGTATCCCGACCCTGGTCTTATATCGATAATGAGAAGTGCTGAATGCATGGCATCTGCGTCTTCTGGAGGCTTTCATGACATTATCAAAAAGGAGGGTTTTTACAACCCGCACCCCTCAATCAGTCTTAAAGAAATCCACTCTGATCCATGCCTGCAAGGATCAACAGGTTTTTCAAATAGTGTCCTTAACTCCCAATACCTTAAGGCGGTACAGGAGTTACTTGATGAAATAGTTAATGTCCGAAAGGCTTTTAAGCAACATGGCATGGAAAAACAAGATAACTTGCGTGACATTGGATTAGATGGCTCCAAAGATTCTGATGGAAAATCTACCAGTCAATCTATGCAAATATCTTCAGGCCCTAATGGTTCTACTGGCAATCCTTCTTGTGAACTATCAGCTGGAGAACGGCAGAATTTGTTGGACAAGAAGACAAAGCTTTTGTCCATGTTGGATGAGGTTGATAAAAGATACAGACAGTATTGCCATCAGATGCAGATTGTGGTGTCATCTTTCGATATGGTTGCTGGGTGTGGAGCAGCAGAACCATATACTACACTTGCTTTGCGAACAATTTCTCGCCACTTTCGCTGTTTGCGTGATGCTATCAGTGGCCAAATTCAAGTGGCACAAAGGGGACTTGGGGAACAAGAGGGAATACCCCGTCTTCGCTATGTGGATCAGCAGCTTAGACAGCAAAAGGCCCTTCAACAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAAGCTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTTCTTCATCCTTACCCCAAGGATTCAGAGAAAATTATGCTAGCGAGACAAACAGGCTTGACCAGGAACCAGGTGGCAAATTGGTTCATCAATGCACGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGAATCGGAGATGAACTGCAATCTTTCTTCTGAAAATATGATCATAGGTAAAAGAGATGATGTTCAAGCGTCTGATAATAAATGGGAAGAGTCACAGGAGAATTTAATAACTGTTGATAGTGTCCAACCGGGGCAACTTCATGGGTTGAAGTCAGAACATGCCTCCTCCACTACTGAATTGGACAGAGAAAATGTGACGGATTCTGGAACAAGGAAATTGCAGGGTAACCAAAGGTTTAGCATGAACAATGATCTTTATTCGAGCGAACCTATGCCAAACAACCAGAACGGTGATGGCAGCCTAATAATGACTTCTACTCCTGTTACATATGATATATCAGAGTTGGGTAACATTACTGTGGGTGGCCACGTCTCACTTGCATTGGAATTGAGGAACTGTGAAAGCGATGGATTTACCATGTCCGATGATGCCATACATAAAAGACGTAATCAGACATTGGCTTCTTCCCCAGAGACTGATTTGCTAGATTATCATTTCACAGATTCAGGAAAGCAACAACACAGGATTGGAAATCCTCATCTTTTGCATGAGTTTGTCGTATGA 1854 0.4347 MYPNQAFSSGSYAEMLSGSSLLPHNYSESVGGQNEVKFFTAMGDTVTMQSIDGHSNTATGDPACNSFAGDSHVVARTQMGIVDNEQNIQCQGLSLSLGTLMPSTASVPSFQYQYPDPGLISIMRSAECMASASSGGFHDIIKKEGFYNPHPSISLKEIHSDPCLQGSTGFSNSVLNSQYLKAVQELLDEIVNVRKAFKQHGMEKQDNLRDIGLDGSKDSDGKSTSQSMQISSGPNGSTGNPSCELSAGERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQIQVAQRGLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGESEMNCNLSSENMIIGKRDDVQASDNKWEESQENLITVDSVQPGQLHGLKSEHASSTTELDRENVTDSGTRKLQGNQRFSMNNDLYSSEPMPNNQNGDGSLIMTSTPVTYDISELGNITVGGHVSLALELRNCESDGFTMSDDAIHKRRNQTLASSPETDLLDYHFTDSGKQQHRIGNPHLLHEFVV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00152 617 MobiDBLite consensus disorder prediction 484 498 - -
Gabi704g00152 617 SMART prehox3 168 318 IPR006563 -
Gabi704g00152 617 CDD homeodomain 359 420 IPR001356 GO:0003677
Gabi704g00152 617 ProSiteProfiles 'Homeobox' domain profile. 356 419 IPR001356 GO:0003677
Gabi704g00152 617 Pfam Associated with HOX 174 317 IPR006563 -
Gabi704g00152 617 Pfam Homeobox KN domain 376 415 IPR008422 GO:0003677|GO:0006355
Gabi704g00152 617 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 103 452 - -
Gabi704g00152 617 MobiDBLite consensus disorder prediction 478 500 - -
Gabi704g00152 617 FunFam BEL1-like homeodomain protein 4 362 424 - -
Gabi704g00152 617 SMART HOX_1 359 423 IPR001356 GO:0003677
Gabi704g00152 617 MobiDBLite consensus disorder prediction 206 246 - -
Gabi704g00152 617 SUPERFAMILY Homeodomain-like 360 426 IPR009057 -
Gabi704g00152 617 Gene3D - 356 433 - -
Gabi704g00152 617 MobiDBLite consensus disorder prediction 218 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00152 Gabi-Chr704 1208171 1211762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00152 163 617 Homeobox Transcription Factor Family AT2G16400 45.806 7.56e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gabi704g00152 POX 4.6e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00152 - - gmx:100791641 928.702