Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00150 ATGGGCTTTCTGCGACATAGTACGGATTCTCCACTTCCGTTTAGACAAGGAGAAGAACTTGTTTACTACCACCAGCATAGTTTGGGTTCCTTTTTAATTCCCCAGTCACAAGACAAGACCCATTACAAAACAAGTAGTATATCTCACAAGCTCATTATGTCCAACTCCATAACCCATCAAAACCAATTTGAGAACCAAGACCTCGATGCTTATGGCTCTTCCTTAAGGAGCAACAATGCATTTCCTGAAGCCCTGGGAGCATTTCCAAGCATTCAATCTATTGGAGATAGAATAACAAGATCAGTGCACCTTGTGCAAGCTCCTGTAATAGCTGCTGAGGGCTCTGAGATCAGCCACACAAGGCATTTGATGGATCTTCTTGGAGCAGCTAATGAGAGCAATCACCAACCTCAAGGCCTCTCCCTTTCTTTGGGCTCTCACATGCTTGTTCCTTCTGATGAATACAAGCATCGATCCTTAAATCCGGGTCTCATTAACCCCAATTACTTCATGTCTGGACAAGAGGCACGGGAAGCTTGTAATCCAGCAGTGGAGCATCTAACTAGTGACTACTTTTTCACCAGTGGCACTTTTGCTTCTTCTTCTACCTCATTGAACCGTTCTCTTTCCACCTCTTATGGAGCAGATTCTTTTGCTGCTGTCATTGGGAACTCAAGATACCTCAAACCAGCACAGTCCCTTCTTCAAGATCTTGTTGATATTGGCGGAAACATGGTTGATAGCATCAATGAAAAATATGGGGAGAAGTTATTTCATGGGAGTAGAACACTCTCCTCAGAGTTAAAAGCAGAGTTGCGGAATAATGGACCTTTATTGGCTGACAAACATGAACATCAAATGAAAATTGCAAAGTTGATTACTTTGTTGGATGAGGTTGAGGGCAGATATGAGAAATATTACCATCAAATGGAAGAAGTGGTGTCATCATTTGAAATGATAACAGGTCTGGGAGCTGCAAAGTGTTACACTGCTTTGGCACTTCAGGCCATGTCTAGGCATTTCTGCAGCTTGAGAGATTCCATATTGTCACAAATAAATGTGGAGAAAAGAAAACTCTTTCAGGATTTGCCTAAAATCAATAGCGGATTATCTCAACTAAGCTTGTTTGATAGAGATTCTAGACAGAGTAGAATGTCTCTCCAACATCTTGGGGTGATCCAAAACCAACGGCAAGTATGGAGACCCATCAGAGGGTTGCCTGAGACCTCTGTAGCAATTCTTCGTTCTTGGCTATTTGAGCACTTTCTCCACCCTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCCCAGACAGGTTTAACTAAGAACCAAGTCTCAAATTGGTTCATAAATGCTCGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTACAAAGAAGAGTTCGGAGACTCTTCAGAAGACTCCAACCCGCCTGCTAACAACTACTTGGCGAGGGAAGATACCACAGATTGTGTGGAAGATTGA 1491 0.4252 MGFLRHSTDSPLPFRQGEELVYYHQHSLGSFLIPQSQDKTHYKTSSISHKLIMSNSITHQNQFENQDLDAYGSSLRSNNAFPEALGAFPSIQSIGDRITRSVHLVQAPVIAAEGSEISHTRHLMDLLGAANESNHQPQGLSLSLGSHMLVPSDEYKHRSLNPGLINPNYFMSGQEAREACNPAVEHLTSDYFFTSGTFASSSTSLNRSLSTSYGADSFAAVIGNSRYLKPAQSLLQDLVDIGGNMVDSINEKYGEKLFHGSRTLSSELKAELRNNGPLLADKHEHQMKIAKLITLLDEVEGRYEKYYHQMEEVVSSFEMITGLGAAKCYTALALQAMSRHFCSLRDSILSQINVEKRKLFQDLPKINSGLSQLSLFDRDSRQSRMSLQHLGVIQNQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGDSSEDSNPPANNYLAREDTTDCVED 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00150 496 ProSiteProfiles 'Homeobox' domain profile. 419 460 IPR001356 GO:0003677
Gabi704g00150 496 Pfam Associated with HOX 221 348 IPR006563 -
Gabi704g00150 496 Gene3D - 395 475 - -
Gabi704g00150 496 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 138 477 - -
Gabi704g00150 496 Pfam Homeobox KN domain 417 456 IPR008422 GO:0003677|GO:0006355
Gabi704g00150 496 SMART prehox3 216 350 IPR006563 -
Gabi704g00150 496 SMART HOX_1 400 464 IPR001356 GO:0003677
Gabi704g00150 496 SUPERFAMILY Homeodomain-like 406 468 IPR009057 -
Gabi704g00150 496 CDD homeodomain 400 461 IPR001356 GO:0003677
Gabi704g00150 496 MobiDBLite consensus disorder prediction 469 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00150 Gabi-Chr704 1204177 1206456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00150 218 479 Homeobox Transcription Factor Family AT2G16400 50.554 1.31e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gabi704g00150 POX 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00150 - - gmx:100792161 695.271