Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00143 ATGGAGTGCTTGCTTAATAAACAAAAGTTAAAACTCTTAGGTACATTTGACACTGCTGAGGATGCAGCTCGTGCATATGACACTGCTGCTCGAGCTTTGCGTGGTGCTAATGCTAGGACCAACTTTGAATTGCGAGAGTCTGCAACCTCTGGTGCTACAAATAAGCGTGGTGGTGGTTCCAATTTCATTCCTGATAACATTGAACCCTTTTCTTTTGAGGATGTGAATGAGCCAGGGACAGATTCTGATGGCCTTCTTGGTGCACTCAAGGCTAAACTGAAGGAAGGAAGGTTTCCAATTCAATCTCGTTCTAATTGTGTGGTTCAATCTGAGTTATCATCATCAGCTACTGCTTTCTCTCCCATGAATGTTACTGCCAACAACAGCATTGTCCCTGGTTTAATGGTTACTACTTCATCAAACACTTCTGCTAAGAGTGTTCTTATCCCGAATATTCATGATCATGAAGGTGCTTTAATAATTACAAGCAGTGTTGGAGTCAACTCTAATCAACTTTGTCAAACCCCTCCTATGACATGGTCTACTGATATGATATATGCAGATGAGGGTCCATCAAATAGCAACAGGAATGGCCAAATGAATATGGGGAACATGCAATTACCTCTAGTTGGTGGAGAAACGGAAGGCTTTTGGACATTGGAACAGCAACAATTTGTGCAATGTGAGAACAACAGTTGGTTTAGTTCTAGTGTTTCTTGGGATCCTGTTGTATTATTGAGACTTACCCGGGTAAAAATGCCATGTAAAGATGGTAGTAAGGCAAGATTTTATGTTTTTCCTTAG 804 0.4104 MECLLNKQKLKLLGTFDTAEDAARAYDTAARALRGANARTNFELRESATSGATNKRGGGSNFIPDNIEPFSFEDVNEPGTDSDGLLGALKAKLKEGRFPIQSRSNCVVQSELSSSATAFSPMNVTANNSIVPGLMVTTSSNTSAKSVLIPNIHDHEGALIITSSVGVNSNQLCQTPPMTWSTDMIYADEGPSNSNRNGQMNMGNMQLPLVGGETEGFWTLEQQQFVQCENNSWFSSSVSWDPVVLLRLTRVKMPCKDGSKARFYVFP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00143 267 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 138 - -
Gabi704g00143 267 CDD AP2 14 43 IPR001471 GO:0003700|GO:0006355
Gabi704g00143 267 SMART rav1_2 2 49 IPR001471 GO:0003700|GO:0006355
Gabi704g00143 267 SUPERFAMILY DNA-binding domain 7 44 IPR016177 GO:0003677
Gabi704g00143 267 Gene3D AP2/ERF domain 3 45 IPR036955 GO:0003700|GO:0006355
Gabi704g00143 267 ProSiteProfiles AP2/ERF domain profile. 1 43 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00143 Gabi-Chr704 1177950 1180549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00143 13 42 AP2-EREBP Transcription Factor Family AT3G15210 83.333 1.65e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00143 - - gmx:102661478 225.328