Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00140 ATGGCTACTCCTGTTGAGCCTCCGAATGGGATCAGAACTGAAGGAAAGCATTATTATTCCATGTGGCAAACCCTGTTTGAGATTGATACAAAATACGTGCCCATCAAGCCTATTGGTCGAGGAGCATATGGAATTGTGTGCTCTTCTGTCAATAGAGAAACCAATGAAAAAGTTGCAATCAAGAAGATACAGAATGCCTTTGAAAATCGTGTTGATGCACTGAGAACTTTGCGTGAACTGAAACTTCTTCGCCACCTTCACCATGAAAATGTTATTGCTTTAAAAGACATCATGATGCCCGTTTATAGAAACAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCATCAGATTATTAAGTCTTCTCAAGCACTATCTAATGATCACTGTCAATATTTCCTCTTTCAGCTGCTTCGGGGCTTGAAATATCTTCACTCAGCTAACATCCTTCACCGTGACTTGAAACCTGGGAATCTTCTAATTAATGCAAACTGTGACCTGAAAATATGTGATTTTGGGTTAGCACGCACTAACTGCAGCAAGAACCAGTTCATGACTGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAGCTCCTACTCTGCTGTGACAACTATGGGACATCTATTGATGTATGGTCTGTGGGATGCATCTTTGCAGAGCTTCTTGGGCGAAAACCTATTTTCCCTGGTTCAGAGTGTCTCAACCAGCTGAAACTGATTATCAACATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTCATTGATAATCCAAAGGCAAAGAAGTATATCAAATCACTTCCATATTCTCCTGGAACCCCCTTCTCCCGACTCTACCCTAACGCGCATCCATTGGCAATTGATCTGTTGACAAAGATGCTTGTTTTCGATCCAACAAAGAGGATTAGTGTCACTGAAGCGCTTCAACACCCATACATGGCCCCTCTGTATGATCCTAATAGTGACCCTCCAGCCATCATTCCAATTGATCTTGACATTGACGAGGATCTAGGGGAAGAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCCGAATCTACCATGGAAAATGCAGAGTTGTGCTCGTAA 1119 0.4236 MATPVEPPNGIRTEGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPVYRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKKYIKSLPYSPGTPFSRLYPNAHPLAIDLLTKMLVFDPTKRISVTEALQHPYMAPLYDPNSDPPAIIPIDLDIDEDLGEEMIREMMWKEMLHYHPESTMENAELCS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00140 372 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Gabi704g00140 372 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Gabi704g00140 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 336 - -
Gabi704g00140 372 FunFam Mitogen-activated protein kinase 18 126 - -
Gabi704g00140 372 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi704g00140 372 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00140 372 CDD STKc_TEY_MAPK 26 361 - -
Gabi704g00140 372 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Gabi704g00140 372 FunFam Mitogen-activated protein kinase 116 345 - -
Gabi704g00140 372 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Gabi704g00140 372 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00140 372 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00140 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00140 Gabi-Chr704 1159757 1162402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00140 1 370 MAP Kinase Gene Family AT1G10210 85.676 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi704g00140 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00140 K20535 - gmx:100798863 724.546