Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00136 ATGATCCAAGATTTAGGTTATCATCACTGGACAAGTACTGATGCAGAAAGGTGCTTAGAGTTTTCGAAGATTAAGGAAGAGAACTCGGTTGATTTCCCCAAATTCAGTGAAATGCTAAACAGACCTTCGAGCATGGAAGGCTATCAACTTGCTTGTACTACTTCCACAACAAACAATCAGATGAAGAATATTGAGCACAAAGATATGAATGCTCTCAATGAGAAGCTCTTGTTCAAGACCCTTCTTTCCGGAGACTTGTACTCCTCTACTAGTGCTCAAAATTATCCTAATTTTGGTGGTACTAGCATGCCAAGTAGAGGAAATTTCAGCCAGATTTACCCAAGTATAAATATCTCAAACTTGAATCAGTCAACCACTTACAATTCCACAGAAATTTCAAGGTCGACCTTGGATATGAACACGCAGTCTTTAGATCTATTAACCACAGCAAGATCATACAGTGAGGGTTTGAGCCAGCATTCACAAGATCATGATGGTCTTGGTAGATTTCCTGACAACGTTTCTTTTCATCTTCATCAAATGCAGCTCTCCAATGACAGGTCCTCGTGTGGTAACTCTAGTAATCCATCACATTTCACCAATGGGACGGCAGAAACAAAGAGACCCTGCACTTTGATGGAGTCAAAGACTTCTCAATCTCAAACAGCATCAAAGAAATCACGATTGGAATCACGCCCTTCATGCCCACCCTTTAAGGTTAGAAAAGAGAAATTGGGTGATAGGATTGCGGCTCTTCAGCAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTCATGGAGGCTATTGGATACATTAAATTCCTTCAAGGTCAAGTCGAGACACTGAGCGTTCCTTACATGAAGTCATCGCAGAACCAGACCAACAGAGTAATGCAAGGGGGTTCAGCCATAGGCGCCGACGCAAATGGGGAACCAAAGCAAGATCTTAGAAGCCGAGGCCTCTGTCTCGTGCCATTGTCGTGTATGTCGTACATAGCAGGTGATGGGGGAAATGAGGTGTGGCAACAACCAAACTTCGGTGGAGCTACCTAG 1062 0.436 MIQDLGYHHWTSTDAERCLEFSKIKEENSVDFPKFSEMLNRPSSMEGYQLACTTSTTNNQMKNIEHKDMNALNEKLLFKTLLSGDLYSSTSAQNYPNFGGTSMPSRGNFSQIYPSINISNLNQSTTYNSTEISRSTLDMNTQSLDLLTTARSYSEGLSQHSQDHDGLGRFPDNVSFHLHQMQLSNDRSSCGNSSNPSHFTNGTAETKRPCTLMESKTSQSQTASKKSRLESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKSSQNQTNRVMQGGSAIGADANGEPKQDLRSRGLCLVPLSCMSYIAGDGGNEVWQQPNFGGAT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00136 353 MobiDBLite consensus disorder prediction 185 229 - -
Gabi704g00136 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 229 278 IPR011598 GO:0046983
Gabi704g00136 353 CDD bHLH_AtbHLH_like 236 286 IPR045239 -
Gabi704g00136 353 Gene3D - 239 302 IPR036638 GO:0046983
Gabi704g00136 353 FunFam Transcription factor bHLH123 family 239 301 - -
Gabi704g00136 353 MobiDBLite consensus disorder prediction 185 240 - -
Gabi704g00136 353 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 101 333 - -
Gabi704g00136 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 239 292 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00136 Gabi-Chr704 1117701 1121124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00136 23 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 43.935 2.16e-65 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00136 - - mtr:25490216 386.341