Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00115 ATGAGTGATGACTTTGTTTATTATAAGGCCAATGATGGGTTCACTTCTAGAAGTGTAAGCAGGAGTGGCCATGACATCATCTCAAATAGCAGTAACTCATCAGCCTTCATATCTGTCATTTCTAGAAGTGAGGGTGAGATCTTGCAATCTTCCAATTTGAAAAGCTTCAGCTACAGTGAACTAAGAGCAGCCACAAGAATATTTCGCCCAGATAGTGTCTTAGGGGAGGGTGGATTTGGTTATGTTTTTAAGGGCTGGATTGATGAGCATTCACTTGCCGCTACCAAACCAGGAATCGACATGATTGTTGCTGTAAAGAGGCTTAACCAAGAGGACTTCCAGGGTCACAAAGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATTCTAATCTTGTCAAGTTAATAGGATACTACTTCGAGGATGAGCATCGGCTTCTGGTTTATGAATTTATGCCTAAGGGCAGCATGGAGAATCATCTGTTCAGAAAGGTTCTTATTATCAGCCATTTCTCTTGGAGTTTACGATTGAAAATAGCCCTTAAGGCTGCAAGATGTCTTGTTTTTCTCCATAGTACAGAACCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTACTTGATACTAACTATAAGGCCAAACTCTCTGATTTTGGGTTGGCCAGAGATGGGCCAACTGGTGATAAAAGCCATGTCTCTACTAGGGTCATCGGAACCCGTGGATACGTGGCACCAGAGTATCTTGTAACAGGTCATCTCACTGCAAAGAGTGATGTATATAGTTTCGGAGTAGTTCTTCTCAAAATAATATCAGGAAGACGAGCTATAGACAAGAACCAACAACCTGGAGAACATAACCTAGTTGAATGGGCCAAACCTTACCTATCTAACAAATGCCGAGTTTTTCGAGTAATGGATCCGCGTCTTGAGGGACAATATTCCCATACTCGAGCTCAAGCAGCAGCCACACTTGCTTTGCAATGTCTTGCTGCAGAACCTAAAAGCAGGCCAAATATGGATGAAGTGGTCAGAGCATTGGAGCTGCTTCAGGAATCAAAGGACATGCAGACAAGAAATGGTGTTCAGAAAGAGCATCGCGAAAGCAGTTCTGTACTCGGCCATCCCAATGTCCGCCCTATAGCTGACAAAGGTAGTGCAGATGCTCCCAGAAAGGCTTCTGCTTATCCTAGGCCTTCTGCTTCTCTCCTTCAAACTTGA 1230 0.4317 MSDDFVYYKANDGFTSRSVSRSGHDIISNSSNSSAFISVISRSEGEILQSSNLKSFSYSELRAATRIFRPDSVLGEGGFGYVFKGWIDEHSLAATKPGIDMIVAVKRLNQEDFQGHKEWLAEINYLGQLQHSNLVKLIGYYFEDEHRLLVYEFMPKGSMENHLFRKVLIISHFSWSLRLKIALKAARCLVFLHSTEPKVIYRDFKTSNILLDTNYKAKLSDFGLARDGPTGDKSHVSTRVIGTRGYVAPEYLVTGHLTAKSDVYSFGVVLLKIISGRRAIDKNQQPGEHNLVEWAKPYLSNKCRVFRVMDPRLEGQYSHTRAQAAATLALQCLAAEPKSRPNMDEVVRALELLQESKDMQTRNGVQKEHRESSSVLGHPNVRPIADKGSADAPRKASAYPRPSASLLQT 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00115 409 SUPERFAMILY Protein kinase-like (PK-like) 36 352 IPR011009 -
Gabi704g00115 409 MobiDBLite consensus disorder prediction 357 409 - -
Gabi704g00115 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Gabi704g00115 409 ProSitePatterns Protein kinases ATP-binding region signature. 74 106 IPR017441 GO:0005524
Gabi704g00115 409 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00115 409 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 154 364 - -
Gabi704g00115 409 Gene3D Transferase(Phosphotransferase) domain 1 154 376 - -
Gabi704g00115 409 PANTHER OS01G0588500 PROTEIN-RELATED 34 354 - -
Gabi704g00115 409 MobiDBLite consensus disorder prediction 361 375 - -
Gabi704g00115 409 Gene3D Phosphorylase Kinase; domain 1 43 153 - -
Gabi704g00115 409 FunFam Serine/threonine-protein kinase BIK1 36 153 - -
Gabi704g00115 409 ProSiteProfiles Protein kinase domain profile. 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00115 Gabi-Chr704 996478 1001010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00115 46 358 Glycoside Hydrolase AT3G07070 47.452 5.87e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi704g00115 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00115 - - gmx:100819620 605.134