Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00110 ATGGCGTTTGATCAAAATTCTGTTCCAAAGGATCTGCGCCCATTGAACGTAACTCCGGCGATGGCTGAGGAGCCTCTCATTTCGCCGGCAACCACCACGCCTCCCTCCCCCAACGACCCTTTCTACCTGCCGTCCGCTTCCGATGGGTTTGTATATGGGAACATGGGTTCCAGTCTTGCAGCAACCTGGTGCGTTTGCCCTGGTCCTATTGGGTTTAACTATGGTTCTAGTTTTGGTAACAGGGTTGCGACTGGGAATGCTTTGGATTCGGGCAATTGGGTAGGGGCTAATAATGGCTTGGATAAGGTTACTGTGAATGGTTATGCTTATGGTGGTGCTTTTCGGGGCAATAGAGTCGTTGGCAATGTCAGTGATCCCACTCCTAGCCCTAGCCACCGGGGTGATGATGCTGGGGGTGATTCGGTTTCGGGGAAAAGAGTGAAGTTTTTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACTAGGATCATTAGTGTTGGGAAAGATGTGAGCTTCAATGATTTGGTGCAGAAGATGGTTAATGCTTGTGGTCAACCTGTGGTTATCAAGTATCAACTCCCTGAGGAGGATCTTGATTCATTGGTGTCCGTTTCCTGCCCTGATGATGTTGAAAATATGATGGAGGAGTATGAAAAATTAATTGAGAGATCCCCTGATGGTTCTGCTAAATTGAGGGTTTTTCTGTTTTCTGCTTCAGAGCTTGAACTTTCTGGTGGGGGACAGTCTGGGGACTCGAAAGATAGTGGGCAGAAATATTTTGATGCTGTGAATGGAATCGCAGATGGGAATGGGATTATTGGTGGAATCACTAAAAAGGAGAGTATTGCAAGTGCAGCTTCAACCCAGAATTCAGATTTGAGTGGGACAGAGACTCTTGATAGCTTAATTGCCGGTCAAGGGGATGTCAGTGGGATGCCCGTGTCCTGTGTGTTATCACCCAAGGAGACTGTGGCAGCTTCTCCTGACACAACTGCAAATTTGGTGGCTTTGGAGCCCAGTGCAGCAGTATACTCAGGTGCTTCTGCTGTTTCAGTGGGCACGCCTGTGGCTAATAGTCCAACTTACACTGCATATTTCCAGAATGAGGTTGAGTTAGAAAAGTCTGTACCTATTACTTTATCCCAGCAGCCATTTGGATTGCAGCAATCTGGAATAGAAATTCAGTCACCTTCACCTTACTTGCAGCCTTTTGTTGATCCGCGCCAGGAGGTTATGAACCATGTAGATTATGTCCATCTGCCTCCCCAGATGGGGTTCCCAAATCCTCAGCTTCTAGGGAAGACTGGGCCTGTCTTCACCCAACAGCAGTTTCATGATAATACTCCCGGTTTAGCATTCCATCAGGTCATCCCTGGAGTACAAATGACAACGACTCAACCATCTTCTTACGTTGGTGTAAGACCGAATGTCATTCAACCACAACCATTGATGCAACCACAGCAAAATCGTTTGGATCAATACAATAATGAAAACACATCAGGGATAAGGATTATCCAGCTTCCTGCTGAACGCAGTTACAACTCATACCAGGTTCCTGTGAGTCAAGTCCCATCTGTCATAGTTGGAGGTAATTATGGCTGGGTTCAGGTTCCTCCACAAGAGCATGTTGTTTTCTCTGATGGGTTATTGCCTAAACAACAAGTAATGATCCCTGAGAAAATCCAAAGAACTGAGGACTGTTCTATGTGTCAGACAAAACTACCTCATGCACACTCAGATCCAGTGGTGCCGGATCAGCATAGTAGTGGTGAAGGTCCAATTCCTGATTCAACCCCAACTTACCATAGTTTCCCAATGGAGGACAATTCAAAAGCTCAAGCAACAAATAGGGTTATGGTGACTGCTGCACCCTTGAAGGAAGGTGTTGTTGAACAAGGTGCTGGGACCAGACCCAGGGTCGTTAGCAAATTAGAACCTCCTGACGAAGTACCTTTTACTGATACAATTGGGCTTTCTCATAATCGTGAGCGACAGCCTGAAGGTGGGAGGATTTTTATACAAAAACCAGACGGGTTTGGCCATCCCAGGGATTCATATATCCAGCAAATGATTGGAAGGGCAGGTGGAAAACAGTCTTCAAGTGATGATCTCATGGGAACAGCACCACTGTCTTATCTAGATGATGTTGTCCACCAGCAGCATATGGTGTCAGTTGAAAACTGGGTTAAACAGGATGTGCTTGTGCATAAACCTGTGAATAATGATATACGTATAGTTGAAAGAATAGATAAACAAACTTCGGAGTGTGTGATTCAAGGATCTCCAAAAGAGCATACTAATGAGCTTACTGGTGTTGTTTCAAAATCAGATGCAGTAGTTAACTGGATTAGTCAGGACCATCTAAAAACTATTGATGGAAGAATGGACATCCTCAAGATACGCAATCCTGAAGGTAATGTAAGTAATGATCACTATTTGCTGCCAGTTGATAAACCTAGTGGGAATGATAAAATAGATTACAACACTCAGCAAGCTGTAGAGGAAGAGGTGATTCTGGATAAAAACTTTGGCAGGCCAAAATTGTTAGTTGATACAAATCAAATTAAGATGACAGGTGTGACGCCTTGTTCTTCTATGGAGATTTCATATGGTCACAATGCCTGGCCGCGGGAATACAACGAGGTTGCACAACCCTCTGTTTGGGGCATTCCTGGTTCAAATCCTCAATCAAAGAGTGGAAACTCCCGCAAGGATGATGCTGCATCATCTTCAATATCACCATCTGCCAGGTTTGGAGATATGCAGGATTCTCCAAACTCACTCTTCAGCAATCAGGATCCCTGGAATATACAGCATGAAACATTCTTTCCACCTGCTAGAGCTAGCAATGCTGCATCGAAGAAAGATACCTGTTCTTATAAGGATCACTTTGGTGAGAATCCAGGCAACTGTGGGGAACAAAATTTAGAAGCACAATTGGATGATGATGGCCTTTGCGGGTCATTCAGACAGAATTTAACTTTAGAACATGCTCAGTTTGCCAAAGGCTCAGCAGAAGACCAACAACTTCAAGCTGTTGCTGAAGATGTAGCCGCTTCTGTTTTGCACCCAAATCCTGATTTGCATGCCAGAGGTGTTTCCTGTCGTGAAAACATTGAGGATGGGGATGTTCAAAATAATCTATTAAATGATGTCAAGAGTAAGCCACCAGAAAAGGCAAATTTTGGCTTTCCACCATCGAATGTTGGAGGATTGCAGGTTATAAAGAACTGTGATCTTGAAGAGCTGACTGAATTGGGTTCGGGTACCTTTGGGACTGTATATCATGGAAAGTGGAGGGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTCGCTGATTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTTAATGGTTCTTTAAGAAATGCCTTGCAGGAGTGTGCAAGGAATCTTGATAAGCGCAAGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTACATTTTGATTTGAAAAGTGACAATTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAACGTCAGACACTGATCTCTGGCGGTGTGAGAGGAACTCTACCGTGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTGATGTGGGAACTCTTCACTGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGAATTGTGAGCAACACTTTGCGCCCGCCGGTTCCTGAATCTTGTGACCCAGAATGGAGATTGCTGATGGAGAGGTGCTGGTCCTCTGAGCCATCAGAGAGACCTAGCTTCACTGAGATTGCCAATGAATTACGTTCTATTGCAACCAAGATATCTTCCAAAGGACAGCAAAATCAGCAGCTGCAACACTATTCCTTGCAGACTCAACTCCATAAATAA 4152 0.4492 MAFDQNSVPKDLRPLNVTPAMAEEPLISPATTTPPSPNDPFYLPSASDGFVYGNMGSSLAATWCVCPGPIGFNYGSSFGNRVATGNALDSGNWVGANNGLDKVTVNGYAYGGAFRGNRVVGNVSDPTPSPSHRGDDAGGDSVSGKRVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVGKDVSFNDLVQKMVNACGQPVVIKYQLPEEDLDSLVSVSCPDDVENMMEEYEKLIERSPDGSAKLRVFLFSASELELSGGGQSGDSKDSGQKYFDAVNGIADGNGIIGGITKKESIASAASTQNSDLSGTETLDSLIAGQGDVSGMPVSCVLSPKETVAASPDTTANLVALEPSAAVYSGASAVSVGTPVANSPTYTAYFQNEVELEKSVPITLSQQPFGLQQSGIEIQSPSPYLQPFVDPRQEVMNHVDYVHLPPQMGFPNPQLLGKTGPVFTQQQFHDNTPGLAFHQVIPGVQMTTTQPSSYVGVRPNVIQPQPLMQPQQNRLDQYNNENTSGIRIIQLPAERSYNSYQVPVSQVPSVIVGGNYGWVQVPPQEHVVFSDGLLPKQQVMIPEKIQRTEDCSMCQTKLPHAHSDPVVPDQHSSGEGPIPDSTPTYHSFPMEDNSKAQATNRVMVTAAPLKEGVVEQGAGTRPRVVSKLEPPDEVPFTDTIGLSHNRERQPEGGRIFIQKPDGFGHPRDSYIQQMIGRAGGKQSSSDDLMGTAPLSYLDDVVHQQHMVSVENWVKQDVLVHKPVNNDIRIVERIDKQTSECVIQGSPKEHTNELTGVVSKSDAVVNWISQDHLKTIDGRMDILKIRNPEGNVSNDHYLLPVDKPSGNDKIDYNTQQAVEEEVILDKNFGRPKLLVDTNQIKMTGVTPCSSMEISYGHNAWPREYNEVAQPSVWGIPGSNPQSKSGNSRKDDAASSSISPSARFGDMQDSPNSLFSNQDPWNIQHETFFPPARASNAASKKDTCSYKDHFGENPGNCGEQNLEAQLDDDGLCGSFRQNLTLEHAQFAKGSAEDQQLQAVAEDVAASVLHPNPDLHARGVSCRENIEDGDVQNNLLNDVKSKPPEKANFGFPPSNVGGLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQECARNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELFTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFTEIANELRSIATKISSKGQQNQQLQHYSLQTQLHK 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00110 1383 MobiDBLite consensus disorder prediction 119 141 - -
Gabi704g00110 1383 SMART PB1_new 161 250 IPR000270 GO:0005515
Gabi704g00110 1383 Gene3D - 167 250 - -
Gabi704g00110 1383 ProSitePatterns Protein kinases ATP-binding region signature. 1098 1129 IPR017441 GO:0005524
Gabi704g00110 1383 PANTHER SERINE-THREONINE PROTEIN KINASE 213 1359 - -
Gabi704g00110 1383 MobiDBLite consensus disorder prediction 898 945 - -
Gabi704g00110 1383 MobiDBLite consensus disorder prediction 899 945 - -
Gabi704g00110 1383 ProSiteProfiles Protein kinase domain profile. 1092 1358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00110 1383 Gene3D Phosphorylase Kinase; domain 1 1085 1179 - -
Gabi704g00110 1383 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1180 1371 - -
Gabi704g00110 1383 SMART serkin_6 1092 1358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00110 1383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1217 1229 IPR008271 GO:0004672|GO:0006468
Gabi704g00110 1383 CDD PB1_UP2 150 248 - -
Gabi704g00110 1383 MobiDBLite consensus disorder prediction 653 677 - -
Gabi704g00110 1383 Pfam PB1 domain 166 249 IPR000270 GO:0005515
Gabi704g00110 1383 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 166 250 - -
Gabi704g00110 1383 SUPERFAMILY CAD & PB1 domains 162 252 - -
Gabi704g00110 1383 Pfam Protein tyrosine and serine/threonine kinase 1095 1355 IPR001245 GO:0004672|GO:0006468
Gabi704g00110 1383 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1085 1179 - -
Gabi704g00110 1383 SUPERFAMILY Protein kinase-like (PK-like) 1085 1354 IPR011009 -
Gabi704g00110 1383 Gene3D Transferase(Phosphotransferase) domain 1 1180 1383 - -
Gabi704g00110 1383 PRINTS Tyrosine kinase catalytic domain signature 1211 1229 IPR001245 GO:0004672|GO:0006468
Gabi704g00110 1383 PRINTS Tyrosine kinase catalytic domain signature 1326 1348 IPR001245 GO:0004672|GO:0006468
Gabi704g00110 1383 PRINTS Tyrosine kinase catalytic domain signature 1282 1304 IPR001245 GO:0004672|GO:0006468
Gabi704g00110 1383 PRINTS Tyrosine kinase catalytic domain signature 1174 1187 IPR001245 GO:0004672|GO:0006468
Gabi704g00110 1383 CDD STKc_MAP3K-like 1098 1355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00110 Gabi-Chr704 958589 966063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00110 145 629 MAP Kinase Kinase Kinase AT3G46920 40.204 8.93e-89 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gabi704g00110 PK_Tyr_Ser-Thr 6.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00110 - - gmx:100819234 1739.55