Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00109 ATGGCGTTTGATCAAAATTCTGTTCCAAAGGATCTGCGCCCATTGAACGTAACTCCGGCGATGGCTGAGGAGCCTCTCATTTCGCCGGCAACCACCACGCCTCCCTCCCCCAACGACCCTTTCTACCTGCCGTCCGCTTCCGATGGGTTTGTATATGGGAACATGGGTTCCAGTCTTGCAGCAACCTGGTGCGTTTGCCCTGGTCCTATTGGGTTTAACTATGGTTCTAGTTTTGGTAACAGGGTTGCGACTGGGAATGCTTTGGATTCGGGCAATTGGGTAGGGGCTAATAATGGCTTGGATAAGGTTACTGTGAATGGTTATGCTTATGGTGGTGCTTTTCGGGGCAATAGAGTCGTTGGCAATGTCAGTGATCCCACTCCTAGCCCTAGCCACCGGGGTGATGATGCTGGGGGTGATTCGGTTTCGGGGAAAAGAGTGAAGTTTTTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACTAGGATCATTAGTGTTGGGAAAGATGTGAGCTTCAATGATTTGGTGCAGAAGATGGTTAATGCTTGTGGTCAACCTGTGGTTATCAAGTATCAACTCCCTGAGGAGGATCTTGATTCATTGGTGTCCGTTTCCTGCCCTGATGATGTTGAAAATATGATGGAGGAGTATGAAAAATTAATTGAGAGATCCCCTGATGGTTCTGCTAAATTGAGGGTTTTTCTGTTTTCTGCTTCAGAGCTTGAACTTTCTGGTGGGGGACAGTCTGGGGACTCGAAAGATAGTGGGCAGAAATATTTTGATGCTGTGAATGGAATCGCAGATGGGAATGGGATTATTGGTGGAATCACTAAAAAGGAGAGTATTGCAAGTGCAGCTTCAACCCAGAATTCAGATTTGAGTGGGACAGAGACTCTTGATAGCTTAATTGCCGGTCAAGGGGATGTCAGTGGGATGCCCGTGTCCTGTGTGTTATCACCCAAGGAGACTGTGGCAGCTTCTCCTGACACAACTGCAAATTTGGTGGCTTTGGAGCCCAGTGCAGCAGTATACTCAGGTGCTTCTGCTGTTTCAGTGGGCACGCCTGTGGCTAATAGTCCAACTTACACTGCATATTTCCAGAATGAGGTTGAGTTAGAAAAGTCTGTACCTATTACTTTATCCCAGCAGCCATTTGGATTGCAGCAATCTGGAATAGAAATTCAGTCACCTTCACCTTACTTGCAGCCTTTTGTTGATCCGCGCCAGGAGGTTATGAACCATGTAGATTATGTCCATCTGCCTCCCCAGATGGGGTTCCCAAATCCTCAGCTTCTAGGGAAGACTGGGCCTGTCTTCACCCAACAGCAGTTTCATGATAATACTCCCGGTTTAGCATTCCATCAGGTCATCCCTGGAGTACAAATGACAACGACTCAACCATCTTCTTACGTTGGTGTAAGACCGAATGTCATTCAACCACAACCATTGATGCAACCACAGCAAAATCGTTTGGATCAATACAATAATGAAAACACATCAGGGATAAGGATTATCCAGCTTCCTGCTGAACGCAGTTACAACTCATACCAGGTTCCTGTGAGTCAAGTCCCATCTGTCATAGTTGGAGGTAATTATGGCTGGGTTCAGGTTCCTCCACAAGAGCATGTTGTTTTCTCTGATGGGTTATTGCCTAAACAACAAGTAATGATCCCTGAGAAAATCCAAAGAACTGAGGACTGTTCTATGTGTCAGACAAAACTACCTCATGCACACTCAGATCCAGTGGTGCCGGATCAGCATAGTAGTGGTGAAGGTCCAATTCCTGATTCAACCCCAACTTACCATAGTTTCCCAATGGAGGACAATTCAAAAGCTCAAGCAACAAATAGGGTTATGGTGACTGCTGCACCCTTGAAGGAAGGTGTTGTTGAACAAGGTGCTGGGACCAGACCCAGGGTCGTTAGCAAATTAGAACCTCCTGACGAAGTACCTTTTACTGATACAATTGGGCTTTCTCATAATCGTGAGCGACAGCCTGAAGGTGGGAGGATTTTTATACAAAAACCAGACGGGTTTGGCCATCCCAGGGATTCATATATCCAGCAAATGATTGGAAGGGCAGGTGGAAAACAGTCTTCAAGTGATGATCTCATGGGAACAGCACCACTGTCTTATCTAGATGATGTTGTCCACCAGCAGCATATGGTGTCAGTTGAAAACTGGGTTAAACAGGATGTGCTTGTGCATAAACCTGTGAATAATGATATACGTATAGTTGAAAGAATAGATAAACAAACTTCGGAGTGTGTGATTCAAGGATCTCCAAAAGAGCATACTAATGAGCTTACTGGTGTTGTTTCAAAATCAGATGCAGTAGTTAACTGGATTAGTCAGGACCATCTAAAAACTATTGATGGAAGAATGGACATCCTCAAGATACGCAATCCTGAAGGTAATGTAAGTAATGATCACTATTTGCTGCCAGTTGATAAACCTAGTGGGAATGATAAAATAGATTACAACACTCAGCAAGCTGTAGAGGAAGAGGTGATTCTGGATAAAAACTTTGGCAGGCCAAAATTGTTAGTTGATACAAATCAAATTAAGATGACAGGTGTGACGCCTTGTTCTTCTATGGAGATTTCATATGGTCACAATGCCTGGCCGCGGGAATACAACGAGGTTGCACAACCCTCTGTTTGGGGCATTCCTGGTTCAAATCCTCAATCAAAGAGTGGAAACTCCCGCAAGGATGATGCTGCATCATCTTCAATATCACCATCTGCCAGGTTTGGAGATATGCAGGATTCTCCAAACTCACTCTTCAGCAATCAGGATCCCTGGAATATACAGCATGAAACATTCTTTCCACCTGCTAGAGCTAGCAATGCTGCATCGAAGAAAGATACCTGTTCTTATAAGGATCACTTTGGTGAGAATCCAGGCAACTGTGGGGAACAAAATTTAGAAGCACAATTGGATGATGATGGCCTTTGCGGGTCATTCAGACAGAATTTAACTTTAGAACATGCTCAGTTTGCCAAAGGCTCAGCAGAAGACCAACAACTTCAAGCTGTTGCTGAAGATGTAGCCGCTTCTGTTTTGCACCCAAATCCTGATTTGCATGCCAGAGGTGTTTCCTGTCGTGAAAACATTGAGGATGGGGATGTTCAAAATAATCTATTAAATGTAAAGTGTAGAGATAAAACTCAGGATGTCAAGAGTAAGCCACCAGAAAAGGCAAATTTTGGCTTTCCACCATCGAATGTTGGAGGATTGCAGGTTATAAAGAACTGTGATCTTGAAGAGCTGACTGAATTGGGTTCGGGTACCTTTGGGACTGTATATCATGGAAAGTGGAGGGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTCGCTGATTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTTAATGGTTCTTTAAGAAATGCCTTGCAGGAGTGTGCAAGGAATCTTGATAAGCGCAAGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTACATTTTGATTTGAAAAGTGACAATTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAACGTCAGACACTGATCTCTGGCGGTGTGAGAGGAACTCTACCGTGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTGATGTGGGAACTCTTCACTGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGAATTGTGAGCAACACTTTGCGCCCGCCGGTTCCTGAATCTTGTGACCCAGAATGGAGATTGCTGATGGAGAGGTGCTGGTCCTCTGAGCCATCAGAGAGACCTAGCTTCACTGAGATTGCCAATGAATTACGTTCTATTGCAACCAAGATATCTTCCAAAGGACAGCAAAATCAGCAGCTGCAACACTATTCCTTGCAGACTCAACTCCATAAATAA 4176 0.4485 MAFDQNSVPKDLRPLNVTPAMAEEPLISPATTTPPSPNDPFYLPSASDGFVYGNMGSSLAATWCVCPGPIGFNYGSSFGNRVATGNALDSGNWVGANNGLDKVTVNGYAYGGAFRGNRVVGNVSDPTPSPSHRGDDAGGDSVSGKRVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVGKDVSFNDLVQKMVNACGQPVVIKYQLPEEDLDSLVSVSCPDDVENMMEEYEKLIERSPDGSAKLRVFLFSASELELSGGGQSGDSKDSGQKYFDAVNGIADGNGIIGGITKKESIASAASTQNSDLSGTETLDSLIAGQGDVSGMPVSCVLSPKETVAASPDTTANLVALEPSAAVYSGASAVSVGTPVANSPTYTAYFQNEVELEKSVPITLSQQPFGLQQSGIEIQSPSPYLQPFVDPRQEVMNHVDYVHLPPQMGFPNPQLLGKTGPVFTQQQFHDNTPGLAFHQVIPGVQMTTTQPSSYVGVRPNVIQPQPLMQPQQNRLDQYNNENTSGIRIIQLPAERSYNSYQVPVSQVPSVIVGGNYGWVQVPPQEHVVFSDGLLPKQQVMIPEKIQRTEDCSMCQTKLPHAHSDPVVPDQHSSGEGPIPDSTPTYHSFPMEDNSKAQATNRVMVTAAPLKEGVVEQGAGTRPRVVSKLEPPDEVPFTDTIGLSHNRERQPEGGRIFIQKPDGFGHPRDSYIQQMIGRAGGKQSSSDDLMGTAPLSYLDDVVHQQHMVSVENWVKQDVLVHKPVNNDIRIVERIDKQTSECVIQGSPKEHTNELTGVVSKSDAVVNWISQDHLKTIDGRMDILKIRNPEGNVSNDHYLLPVDKPSGNDKIDYNTQQAVEEEVILDKNFGRPKLLVDTNQIKMTGVTPCSSMEISYGHNAWPREYNEVAQPSVWGIPGSNPQSKSGNSRKDDAASSSISPSARFGDMQDSPNSLFSNQDPWNIQHETFFPPARASNAASKKDTCSYKDHFGENPGNCGEQNLEAQLDDDGLCGSFRQNLTLEHAQFAKGSAEDQQLQAVAEDVAASVLHPNPDLHARGVSCRENIEDGDVQNNLLNVKCRDKTQDVKSKPPEKANFGFPPSNVGGLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQECARNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELFTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFTEIANELRSIATKISSKGQQNQQLQHYSLQTQLHK 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00109 1391 MobiDBLite consensus disorder prediction 119 141 - -
Gabi704g00109 1391 SMART PB1_new 161 250 IPR000270 GO:0005515
Gabi704g00109 1391 ProSitePatterns Protein kinases ATP-binding region signature. 1106 1137 IPR017441 GO:0005524
Gabi704g00109 1391 PRINTS Tyrosine kinase catalytic domain signature 1182 1195 IPR001245 GO:0004672|GO:0006468
Gabi704g00109 1391 PRINTS Tyrosine kinase catalytic domain signature 1334 1356 IPR001245 GO:0004672|GO:0006468
Gabi704g00109 1391 PRINTS Tyrosine kinase catalytic domain signature 1290 1312 IPR001245 GO:0004672|GO:0006468
Gabi704g00109 1391 PRINTS Tyrosine kinase catalytic domain signature 1219 1237 IPR001245 GO:0004672|GO:0006468
Gabi704g00109 1391 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1188 1379 - -
Gabi704g00109 1391 MobiDBLite consensus disorder prediction 898 945 - -
Gabi704g00109 1391 MobiDBLite consensus disorder prediction 899 945 - -
Gabi704g00109 1391 SMART serkin_6 1100 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00109 1391 Gene3D Phosphorylase Kinase; domain 1 1093 1187 - -
Gabi704g00109 1391 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1093 1187 - -
Gabi704g00109 1391 CDD STKc_MAP3K-like 1106 1363 - -
Gabi704g00109 1391 CDD PB1_UP2 150 248 - -
Gabi704g00109 1391 MobiDBLite consensus disorder prediction 653 677 - -
Gabi704g00109 1391 Pfam PB1 domain 166 249 IPR000270 GO:0005515
Gabi704g00109 1391 Gene3D - 167 250 - -
Gabi704g00109 1391 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 166 250 - -
Gabi704g00109 1391 SUPERFAMILY CAD & PB1 domains 162 252 - -
Gabi704g00109 1391 SUPERFAMILY Protein kinase-like (PK-like) 1093 1362 IPR011009 -
Gabi704g00109 1391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1225 1237 IPR008271 GO:0004672|GO:0006468
Gabi704g00109 1391 ProSiteProfiles Protein kinase domain profile. 1100 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00109 1391 PANTHER SERINE-THREONINE PROTEIN KINASE 213 1367 - -
Gabi704g00109 1391 Gene3D Transferase(Phosphotransferase) domain 1 1188 1391 - -
Gabi704g00109 1391 Pfam Protein tyrosine and serine/threonine kinase 1103 1363 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00109 Gabi-Chr704 958589 966063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00109 145 629 MAP Kinase Kinase Kinase AT3G46920 40.204 8.21e-89 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gabi704g00109 PK_Tyr_Ser-Thr 6.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00109 - - gmx:100819234 1756.5