Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi704g00105 | ATGGGTTCGGCCTCTAGTAGACATGGGTCTCGCCCTTCTAGTCCCAGGGTCAACCGCTTCAGACTATCCTCTCTTCTCTGTGGCACCTCCACCTCCCGTTCTACTTATCAGATGGAAGAACATCCATCTGATCTTCAGGTAAATTCGGCAAGAGATTTTGATGATGGAATTCGGAAAGTCACTGAGGAGTCATCTTTAGCAAGTAGAGAAGATAGAATTAGCTGCAGTCCTCATGCTGAAACTGTAACTTTACCTGATATGAGAACTGAGTTCTACGGGAATACCAATGTTGAAGGTTCTTCCAGAAATGTTGCAACAAGTAGTCAGAGGAAGTGCTTGTCTGAATGTAAGGAGCTAGTCCCTCATCAGGTAAGTGCCGGTCATAGTCGTCATGAATCATATAGTCATAGTAGCAACACAGCTAGTACTTCATTTGTAGAACAGCGGTCTTCAGATCCAGTCTCTGTTAATGTTTCTGCTAACAAGGATGCAGTCAATAATGTTGATGATCCAGTGGTTAGTGGTGTCTCTCAAATCTCTTGCGAGACAATGCATCCAAGGAGTCCAATCCCTCAAGAGCATGGAAATTCCAGTTCTGGTGAAATTTCTGTTGAGAATCATACTGAAAACGAACCTCGTCGCGAGACAATACCTTCAGGGTTAGGTATTCTTGTGTCCAATCGGGAAAGAGGTCAAAATGACAGCGTGCTTCAAGTTGATGTGGTCACAATATCTTCCAACATTTTGTCTGCCAGCAATGCTGATTCCAATGATCATGATGCCAGAAGGAATGGTAGGAGATTATTTTGGGATGCTTTTTCACGACGTAGTTCTAGAAGGCTAGGTGATTCTCCAACCATTGTCTTCTCCACTGGAGGTGCTGATGACCCAGGATCTCAAGATCGATGGCTTGTTGATTTTGGTGGTGATTTCTCAAATGATGGGGTTGGAAGTGCTTCTGGGTATATGGGCAGCAGATTTCACAGATTGCATGAACGAATGCAACACTCAAGATCTGAGATCTGGGAAAGGCTTCGTGGTAGCTTTGATGAGATTGGTAGGTGGAATTCTTCCTGTCCATTAGGACTCCATGCAGATGGTATGTGCTCATGCGAGTCTTTCCCCATGGCTGAGGAATCTAGCACTCAAGCAAGTATTTCAAGAATAGTCATGCTGGCTGAGGCTCTGTTTGAGGTCTTAGATGAAATCCATCGTCAACCTGGATCACTTTCCCTATCCATGGTCTCTTTCCCGGCACCTGAATCAATTGTTGACTCTTTGCCTCTAAAGTCTCACAAAAAGGTTGATGTAGCTGATGGAGGCAATGATGCTGATGAACAATGTTACATATGCCTGGCGGAGTATGAAGAAGGGGACCAAATACGAGTTCTTCCTTGCAACCATGAGTATCACATGTCTTGTGTCGATAAGTGGCTTAAAGAAATACATGGTGTATGTCCTCTGTGTCGTGGCAATGTTTGTGGAGGGTTCACGGAGTCTTCCGCCGACTCAGAAGTGCAGTCTCATTGA | 1530 | 0.4471 | MGSASSRHGSRPSSPRVNRFRLSSLLCGTSTSRSTYQMEEHPSDLQVNSARDFDDGIRKVTEESSLASREDRISCSPHAETVTLPDMRTEFYGNTNVEGSSRNVATSSQRKCLSECKELVPHQVSAGHSRHESYSHSSNTASTSFVEQRSSDPVSVNVSANKDAVNNVDDPVVSGVSQISCETMHPRSPIPQEHGNSSSGEISVENHTENEPRRETIPSGLGILVSNRERGQNDSVLQVDVVTISSNILSASNADSNDHDARRNGRRLFWDAFSRRSSRRLGDSPTIVFSTGGADDPGSQDRWLVDFGGDFSNDGVGSASGYMGSRFHRLHERMQHSRSEIWERLRGSFDEIGRWNSSCPLGLHADGMCSCESFPMAEESSTQASISRIVMLAEALFEVLDEIHRQPGSLSLSMVSFPAPESIVDSLPLKSHKKVDVADGGNDADEQCYICLAEYEEGDQIRVLPCNHEYHMSCVDKWLKEIHGVCPLCRGNVCGGFTESSADSEVQSH | 509 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi704g00105 | 509 | SMART | ring_2 | 448 | 489 | IPR001841 | - | |
Gabi704g00105 | 509 | MobiDBLite | consensus disorder prediction | 186 | 205 | - | - | |
Gabi704g00105 | 509 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Gabi704g00105 | 509 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 413 | 494 | IPR013083 | - | |
Gabi704g00105 | 509 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Gabi704g00105 | 509 | MobiDBLite | consensus disorder prediction | 124 | 152 | - | - | |
Gabi704g00105 | 509 | FunFam | Putative RING zinc finger domain superfamily protein | 414 | 495 | - | - | |
Gabi704g00105 | 509 | MobiDBLite | consensus disorder prediction | 186 | 215 | - | - | |
Gabi704g00105 | 509 | Pfam | Ring finger domain | 447 | 490 | IPR001841 | - | |
Gabi704g00105 | 509 | SUPERFAMILY | RING/U-box | 435 | 493 | - | - | |
Gabi704g00105 | 509 | PANTHER | RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED | 1 | 508 | - | - | |
Gabi704g00105 | 509 | ProSiteProfiles | Zinc finger RING-type profile. | 448 | 490 | IPR001841 | - | |
Gabi704g00105 | 509 | MobiDBLite | consensus disorder prediction | 128 | 152 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi704g00105 | Gabi-Chr704 | 911816 | 916183 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi704g00105 | 337 | 494 | C3H Transcription Factor Family | AT5G45290 | 48.276 | 1.16e-40 | 152 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi704g00105 | - | - | gmx:100783604 | 818.535 |