Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00099 ATGGGAAGCAATGGTACTGAGAAGATCCCTAGCAATAACAACACTGAAAGTTCAGAAACCACTATTGAGATAAAGATTAAAACATTGGATTCACAAACTTACACCCTAAGAGTGGATAAACAGATGCCAGTCCCTGCTCTAAAAGAACAGATTGCTTCTGTAACTGGAGTGTTATCAGAACAGCAGCGCTTAATTTGCCAAGGAAAAGTTCTAAAGGATGACCAACTCCTGTCAGCCTACCATGTTGAAGATGGTCACACCTTGCATATGGTTGTAAGGCAACCTGGTCTACCACCACCAGGAAGTTTGCCCAATCATTCAGTGACTGAACCAAATTCAAGCACAAGCCATGGCCACAGTAATCAAAATCAAGTAGCCCCTGGTGTATTTGTTGAAACTTTCAACGTGCCCATTCAGGGTGATGGAGTTCCTCCTGAAATCAATAGGATTGTTTCTGCTGTTCTAGGATCTATTGGACTTTCAAATTTTGCAAGTGGTGGTGAAGGGATTGATGTCAGGGAACATGAGTTCCAAGGCTTTGGAAGAAATTCGGGTCCTATTGGAATATCTCATTCATCTCATCCTCAATCTGAACAAGCTGGTTTGCGGATTTTGTCTGATAGATCGCGTAATACTTTTGGACTTCCAGCAGCAGTTTCTCTAGGATCTTTGCAGCCTCCTGTTATTCCTGATTCTTTAACAACTTTGTCCCAATACCTAAGTCACATAAGCCATGAATTTGATGCAATTGTCAGGGAAGGGGGGAATAATGTCCAAGCAGCTGAGGCTCATACGAATGAAGAAATGGGGTCTGTTTCATCACGTATGAGTTCAACACCAGAAGGGCTTTCATCACCCGCATCCTTGGCAGAAGTCTTGCTTTCTACCAGACAAATGATCATTGAACAAGCTGGGGAGTGCCTACTTCAACTTGCAAGACAGCTGGAGAATCAAGCAAATGTAACTGATCCCTTGCTGCGGTCAAGCACTCAGTCTTGGGCTATGAGGACTGGAGTTTTGTTTTATAACCTTGGTGCATTTTTACTTGAGCTTGGTCGCACAACCATGACATTGCGTTTGGGTCAAACGCCGTCTGAAGCCATAGTTAATGGTGGGCCTGCAGTTTTTATATCCCCATCTGGTCCTAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCCGGAGCAAGCTTTGGTGCTGTCCCTGTGGGAGCTGCACAATCTATCCCAAGCTTTGGTAGTGGACTTAGCTCAAGTTTTTTCCCAAGGCGTATTGATATACAGATACGACGAGGTACATCAGCAACCACACCCAATGACAATCAAGAAGAGCGGGGTGACACACAATCTGCTTCAGTACAACGAAATCCAGGTGAAAGTTCCGTTAATCAAGCAACCTCTAGGCGTCCGGATACATCTATTGCTGGGGAACCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCTGTACCAGGTCCCTTAGGTCGTCCGCCTTCAGAACCATCTGGTAATTCTATAGGGCTTTACTATCCAGTTCTTGGTAGATTTCAAAATATATCTTCCGGGCATGCAAATAGTGAACAGGGATCTCAACCACCAAGTCAGCATCATGCTGTGCAACAGTCAACTCCTGAATCCACTTTGCAAAGGCAGAGCATGGAGGATTCTGCAAGGAATGGATCCTTACCAACTCCAAGCACGAGGCAAGAGCCATCAAATTCTCGTGTTGTGAATATCAATATTATGGCAGCTGGTGGGTCCCAAAACAACCAAGAACCTGAGAGACAGATACCTAGCAATGTACTTCAGTTTTTAAGGGCACTCTTTCCTGGTGGAGAAATTCATGTCGAAGATTCAAATTTACAAGGAACAACTGCGGGTTCTACCTCAGGGCATGCTGCAACATCAAGGGGTGCTGTCCAGTTATCAACAGAAGCAGAACCCAGCGTTAGCGATGAAGGAATATTTTTGTCTAATTTACTCCGCGAGATCATGCCTGTCATATCTCAACAATTAGGATCTGAGGGAAATCCTTCTGAAGATCAAATGGCTCAAGATTCTTCGACCCAGGTTGAAACTGATGTTGGGACTTCGCGCAGACAGAGTGATTCTGAACCAAGCCCCCCAAATCCAAAACGTCAAAAGATGGAGTGA 2160 0.4472 MGSNGTEKIPSNNNTESSETTIEIKIKTLDSQTYTLRVDKQMPVPALKEQIASVTGVLSEQQRLICQGKVLKDDQLLSAYHVEDGHTLHMVVRQPGLPPPGSLPNHSVTEPNSSTSHGHSNQNQVAPGVFVETFNVPIQGDGVPPEINRIVSAVLGSIGLSNFASGGEGIDVREHEFQGFGRNSGPIGISHSSHPQSEQAGLRILSDRSRNTFGLPAAVSLGSLQPPVIPDSLTTLSQYLSHISHEFDAIVREGGNNVQAAEAHTNEEMGSVSSRMSSTPEGLSSPASLAEVLLSTRQMIIEQAGECLLQLARQLENQANVTDPLLRSSTQSWAMRTGVLFYNLGAFLLELGRTTMTLRLGQTPSEAIVNGGPAVFISPSGPNHIMVQPLPFQPGASFGAVPVGAAQSIPSFGSGLSSSFFPRRIDIQIRRGTSATTPNDNQEERGDTQSASVQRNPGESSVNQATSRRPDTSIAGEPGVRIVPIRTMVAAVPGPLGRPPSEPSGNSIGLYYPVLGRFQNISSGHANSEQGSQPPSQHHAVQQSTPESTLQRQSMEDSARNGSLPTPSTRQEPSNSRVVNINIMAAGGSQNNQEPERQIPSNVLQFLRALFPGGEIHVEDSNLQGTTAGSTSGHAATSRGAVQLSTEAEPSVSDEGIFLSNLLREIMPVISQQLGSEGNPSEDQMAQDSSTQVETDVGTSRRQSDSEPSPPNPKRQKME 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00099 719 Gene3D - 14 119 - -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 94 123 - -
Gabi704g00099 719 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 719 - -
Gabi704g00099 719 SUPERFAMILY Ubiquitin-like 11 111 IPR029071 -
Gabi704g00099 719 PRINTS Ubiquitin signature 74 95 IPR019956 -
Gabi704g00099 719 PRINTS Ubiquitin signature 32 52 IPR019956 -
Gabi704g00099 719 PRINTS Ubiquitin signature 53 73 IPR019956 -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 106 123 - -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 264 284 - -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 431 471 - -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 672 719 - -
Gabi704g00099 719 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Gabi704g00099 719 MobiDBLite consensus disorder prediction 620 652 - -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 672 711 - -
Gabi704g00099 719 SMART ubq_7 22 93 IPR000626 GO:0005515
Gabi704g00099 719 MobiDBLite consensus disorder prediction 620 650 - -
Gabi704g00099 719 MobiDBLite consensus disorder prediction 522 576 - -
Gabi704g00099 719 FunFam Large proline-rich protein BAG6 14 107 - -
Gabi704g00099 719 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Gabi704g00099 719 MobiDBLite consensus disorder prediction 431 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00099 Gabi-Chr704 867616 881626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00099 22 96 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.333 2.16e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00099 K23390 - gmx:100783070 1127.08