Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00090 ATGTCTTCCTCTGTCAAGAAGTACGATGTATTCATTAGCTTCAGGGGTGAGGATACCCGAACCAATTTCACTAGCCATCTTCATAGTACTCTCTGCCACAACAAAATTGAAACATACATTGATTATAATCTTAAAAAGGGAGATGAAGTTGGGCCTGCACTTGCCGAAGCAATCAAGGACTCGCATATCTCTCTCATAGTTTTCTCAATAAACTATGCTTCCTCAAAGTGGTGCTTGGATGAACTCCTCAAAATACTCGAGTGCAGAAAACATCATGGACAGGTAGTTATACCTGTGTTCTATGGAACAGATCCATCAGATGTACGCCACCAGACCGGGAGTTACGAGAAAGCATTCGCAAAACATGAGAGAAATCTCAGGAACAATGAATCCTACCACGACAAAGTGTCTGAGTGGAAAGCTGCTCTCACTATAGCAGCTAATATATCTGGATGGGACTCTCGTACCCATAGGGATGATTCTCAAGTCATCCAAAACATTGTCAATGATGTTTGGCAAAAGCTGTACCTGATGTACCCTAATGAACTGAAAGGCCTTGTTGAAATTGATGAAAATAGTAACTCCATTGAATCCCTACTCAAAAAAGTTCCAAGAATTGGAATTTGGGGCATGGGTGGAATAGGAAAGACTACCATAGCTAGAGACATGTTTGCCAAACACTTTCCACAATATGACAGTGTGTGCTTCCTGGCAAATATAAGAGAAGAATCAGAAAAGTTGGGACTATCATATACACGTGATAAGCTTCTCTTTGAGCTACTAAAGGAACCAATTACCACATCACATGTTACTGGATCCACATTCATTAGGAGGCGGCTCAGTGGTAAAAAAGTTTTCGTTGTACTTGATGATGTGGATAGTTCTGCACAATTAGAATATTTGTGTGAAGAATTAGATGACCTTGGAGCATATAGTAGACTCATTATAACAACAAGAGATAAGCATGTTCTTAGTAGAAGAGTTGATGAGATATTTGAGGTCACAAAATGGAAGTATCCAGAATCTTTGAAGCTTTTTAGCTTAGGAGCCTTCGAGCAAAGCCATCCTAAAGATGGTTATGAGCATCTTTCAGAAAGGGCAGTTGTGTATGCAGGAGGCGTTCCCTTAGCTTTAAGAGTATTGGGCTTACATTTTCATTCCAGAGATGTTGAATTTTGGAAATGTGAATTGAATAAATTTGAGAGCAAGAAGGAATCCTTTAAGGAAATTCAAAACGTGTTACAAGTGAGCTATAATGGATTATCAGAGCTAAACCAGGCAATATTTCTGGACATTGCATTCTTTTTCAAAGATGAAAATAAAGATGATGTCATAAGGATACTTGATGCGTGTGGTTTCTTTGCTACTAGTGGAATAAGAGTCCTTGAAGATAAAGCCCTTATAACTATTTCAAAGAGCAATAGAATACAAATGCATGACTTGCTACAAGAAATGGGTTTGGGTATAGTTCGGAAAGAATTCAGCAAAGACCCAGGAAGACGTAGCCGATTAAGGGATATTGAAGAAGTTTGTGATGTACTTAAAAATAACAAGGGGACTGGTGCGGTTGAAGGCATAACATTAGATTTGTCTCAAAGAGTAGATTTACACTTGACAGCTGACACATTCAACTTGATGATTAGTTTAAGATTTCTTAAATTATATGTTCCTTTGGGTAAGAAGAGTTCAAGTACTGTGTACCATCCTACAGATCTTATGCCATTTTCTGATAAATTGAGATACCTTGAGTGGAATGGATACCCTTTGAAGTCTCTTCCACCACCCTTTTGTGCTAAACTGCTTGTTGAGATTCGCTTGCCGCATAGCAATGTTAAATATCTTTGGCACAACTCGCAGGAACTTGTGAATTTAGAGGGAATGGATCTAAGTGAATGCAAACAGTTGATGGAGCTCCCAGATTTGTCTGGCGCGTCAAAACTCAAATGGCTTTATCTCTCCGGTTGTGAAAGTTTATGCCATGTTCACCAATCTGTCTTTTCTAACGACACACTTGTTACTCTGCTACTGGATAGGTGCAAAAACCTGAATAGTCTTATGAGTAAGAGGCATTTGAGATCTCTACATAAGATCAGTGTCAATGGCTGCTCAAGTCTAAAGGAATTTTCATTGTCCTCGGATTCAATTGAAAGTTTGAATTTAAGCAACACAGGAATCGAAATATTGCACTCATCAATTGGTCATCTAAGAAAGCTTGTGTGGCTCAATCTAGAAGGTTTAAGACTTAAGAATCTTCCAAATGAGTTGTCTGGCCTTACATTTCTTACTGAGTTTTGGATTTCAAACTGCAATATAGTAACTAAACACAAGTTACATGTGCTATTCGATGGCCTGCGATCTTTACAAATACTATATTTGAAAGATTGTCATAACTTGTCTGAACTCCCAGACAACATCAGTGGCTTATTTTCATTATACGAATTAAGACTAGATGGAAGCAGTGTGGAGAGGTTGCCTGCAAGCATTGCAGATCTCTCAAGCCTAGAAATTCTGTCCTTAGAGAATTGCAAGAAGCTTCGGTTTCTGCCAGAGCCTCCTAAAAACATAAAGGAGTTTTATGGAGATAACTGCACTTCATTGGTGACAGTATCAACTTTAAAGACCTTTTCAGAAACAATGAATGGAAAGGAGAAATACATTTCTTTCAAGAATGTTGAGAAATTGGATAAGCCTTCACTCGACTGCATTATGGAAGGTGCACTATTAACAATGAAGAGTGCTGCATTTCACAATATATTAGTAAGAAAATACAGTTTGGAAGCCCACAGCTATAATTACAACAGTGCTGAGGTTTGTTTACCAGGAAGCATAGTCACAGGGCAGTTCAAATACCGAACAACAGATTCCTCCAGAAGTACTATTGTACTTCCTGACCTTTCCTATTTGCTGGGATTCATTTTCTTGGTGGTTGTTTCTCCATCCAATGGATTGAAGAAGCATGGTGATGGTGCTAAAATTCAATGTCAATGCTACTCGGAAGATGGCACAAAGGTGGGATATGCGTCTACATGGCATTATAAAACTGTTACGGATTTAAACTCCGATCATGCTTATGTATGGTATGATCCATTCCATTCTGACAGCATTCTCGGCAGCGATGAAACAAAGGTTTCTTTTGAATTCAGTGTTACAACTGATACTGGGGAACCACATGGGTTGTTCAATGTAAAAGAATGTGGGGTCTGCCCAATATATTTCTCAGAATTTCCAAGTTTTTTACACATAATGAAATTGCCCCAGGCCTTGGAATGGGAGTTGACATTGGAGTTGTCGGCGGAGTTAGGACCAGGGTTATATGAGGCAATGCATCTTCAGTCAGAATCAATTCAAAGTCCTGATGAGAGCAAAAGCAGTGACATAAGTTTCCAGATACAGATACAAGAATTGGACTCCAATGAAAAATGTTGCTGTTCCTATGAATCCTTAGTCGGACATTATATGTTGAACACATTGGAGCAACTTTCTTCTCAATCAACCTTTGCTTTGAACAGGTCGCTTGAGGTGCTTATGGAGATTAATCTGCAGTCAGAACCAGGAAAAGTTCCTGATCATGTTTTTACTTTTGAGTTTATTGGAGAGCAAGAGTCCAAAGATACACAGAATCCATCAGAATAA 3633 0.3884 MSSSVKKYDVFISFRGEDTRTNFTSHLHSTLCHNKIETYIDYNLKKGDEVGPALAEAIKDSHISLIVFSINYASSKWCLDELLKILECRKHHGQVVIPVFYGTDPSDVRHQTGSYEKAFAKHERNLRNNESYHDKVSEWKAALTIAANISGWDSRTHRDDSQVIQNIVNDVWQKLYLMYPNELKGLVEIDENSNSIESLLKKVPRIGIWGMGGIGKTTIARDMFAKHFPQYDSVCFLANIREESEKLGLSYTRDKLLFELLKEPITTSHVTGSTFIRRRLSGKKVFVVLDDVDSSAQLEYLCEELDDLGAYSRLIITTRDKHVLSRRVDEIFEVTKWKYPESLKLFSLGAFEQSHPKDGYEHLSERAVVYAGGVPLALRVLGLHFHSRDVEFWKCELNKFESKKESFKEIQNVLQVSYNGLSELNQAIFLDIAFFFKDENKDDVIRILDACGFFATSGIRVLEDKALITISKSNRIQMHDLLQEMGLGIVRKEFSKDPGRRSRLRDIEEVCDVLKNNKGTGAVEGITLDLSQRVDLHLTADTFNLMISLRFLKLYVPLGKKSSSTVYHPTDLMPFSDKLRYLEWNGYPLKSLPPPFCAKLLVEIRLPHSNVKYLWHNSQELVNLEGMDLSECKQLMELPDLSGASKLKWLYLSGCESLCHVHQSVFSNDTLVTLLLDRCKNLNSLMSKRHLRSLHKISVNGCSSLKEFSLSSDSIESLNLSNTGIEILHSSIGHLRKLVWLNLEGLRLKNLPNELSGLTFLTEFWISNCNIVTKHKLHVLFDGLRSLQILYLKDCHNLSELPDNISGLFSLYELRLDGSSVERLPASIADLSSLEILSLENCKKLRFLPEPPKNIKEFYGDNCTSLVTVSTLKTFSETMNGKEKYISFKNVEKLDKPSLDCIMEGALLTMKSAAFHNILVRKYSLEAHSYNYNSAEVCLPGSIVTGQFKYRTTDSSRSTIVLPDLSYLLGFIFLVVVSPSNGLKKHGDGAKIQCQCYSEDGTKVGYASTWHYKTVTDLNSDHAYVWYDPFHSDSILGSDETKVSFEFSVTTDTGEPHGLFNVKECGVCPIYFSEFPSFLHIMKLPQALEWELTLELSAELGPGLYEAMHLQSESIQSPDESKSSDISFQIQIQELDSNEKCCCSYESLVGHYMLNTLEQLSSQSTFALNRSLEVLMEINLQSEPGKVPDHVFTFEFIGEQESKDTQNPSE 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00090 1210 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 712 IPR044974 GO:0006952
Gabi704g00090 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 432 IPR027417 -
Gabi704g00090 1210 Gene3D - 338 422 IPR042197 -
Gabi704g00090 1210 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 177 - -
Gabi704g00090 1210 Gene3D - 4 175 IPR035897 -
Gabi704g00090 1210 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Gabi704g00090 1210 PRINTS Disease resistance protein signature 371 385 - -
Gabi704g00090 1210 PRINTS Disease resistance protein signature 205 220 - -
Gabi704g00090 1210 PRINTS Disease resistance protein signature 829 845 - -
Gabi704g00090 1210 PRINTS Disease resistance protein signature 279 293 - -
Gabi704g00090 1210 Pfam NB-ARC domain 206 419 IPR002182 GO:0043531
Gabi704g00090 1210 ProSiteProfiles TIR domain profile. 6 175 IPR000157 GO:0007165
Gabi704g00090 1210 Pfam TIR domain 7 184 IPR000157 GO:0007165
Gabi704g00090 1210 Gene3D - 176 331 IPR027417 -
Gabi704g00090 1210 SMART till_3 7 149 IPR000157 GO:0007165
Gabi704g00090 1210 SUPERFAMILY L domain-like 478 869 - -
Gabi704g00090 1210 Gene3D Ribonuclease Inhibitor 526 712 IPR032675 -
Gabi704g00090 1210 Gene3D Ribonuclease Inhibitor 713 895 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00090 Gabi-Chr704 767453 776220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00090 3 854 WRKY Transcription Factor Family AT4G12020 33.486 2.25e-99 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00090 - - psat:127076353 1382.47