Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi704g00023 ATGGAGAAGGAGAAGAAGTGCGGGTGCTGGGCTGTTCTGAAACGCGGTGTTAGAGGTGCGTGCAAATCCTCAGCTTCCAGAGACCCTGCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACACGATACCTGAATGCTAGCAATCGAGCCCTTTGTCCTCCTTATGAAGCTCGACTATCTTCTGACAATCCTGATCCCACACCTAAGGAAAATAAGGCTCCTTGCCAGCTCCTTCAATTTACATTTCAAGAACTAAAAGCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAGGGTGGCTTTGGTTTTGTTTTTAAAGGATGGATTGAGGAAGATGGAACAGCCCCAGCAAAACCTGGGTCAGGGATTACAGTGGCTGTCAAAAGCTTGAAGCCTGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCCTAATCTTGTGAAACTTATCGGCTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCTCTTCCATGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGATTGGCCTTCCTCCACAATGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTTGATACGGAGTATAATGCGAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACTTATGGTTATGCTGCTCCAGAATACGTCATGACAGGACACTTGACAGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTACTTGAGATTTTAACAGGAAGAAGATCCATGGACAGGAAGCGTCCAAGTGGGGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGATAAGCGAAAACTGTACCAACTTGTGGATCCTCGTTTGGAACTAAATTATTCTCTAAAAGGGGTGCAGAAAATTTCCCAGTTAGCTTATAATTGCCTCAATAGAGACTGCAAATGCCGTCCTAACATGGATGAAGTTGTGAAGGCTCTGACTCCATTGCAGGATCTTAACGACCTTGCAATCTTGTCTTATCACTCTCGTTTATCTCAACAAGGGAGACGAAAAAAGAAATCAGATGGAACTCCACAGATCACCTACAATCAATCCAAGAGCATCAGGGCTTCTCCGTTGAATACTGGCAAGCAGCATCGATGA 1293 0.4393 MEKEKKCGCWAVLKRGVRGACKSSASRDPANTIPRTSLVYDAATETRYLNASNRALCPPYEARLSSDNPDPTPKENKAPCQLLQFTFQELKAATGNFRPDSILGEGGFGFVFKGWIEEDGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDRKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYNCLNRDCKCRPNMDEVVKALTPLQDLNDLAILSYHSRLSQQGRRKKKSDGTPQITYNQSKSIRASPLNTGKQHR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi704g00023 430 Gene3D Phosphorylase Kinase; domain 1 72 182 - -
Gabi704g00023 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Gabi704g00023 430 ProSiteProfiles Protein kinase domain profile. 97 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi704g00023 430 MobiDBLite consensus disorder prediction 396 430 - -
Gabi704g00023 430 FunFam Serine/threonine-protein kinase BIK1 65 182 - -
Gabi704g00023 430 MobiDBLite consensus disorder prediction 407 430 - -
Gabi704g00023 430 ProSitePatterns Protein kinases ATP-binding region signature. 103 135 IPR017441 GO:0005524
Gabi704g00023 430 FunFam Probable serine/threonine-protein kinase PBL8 183 396 - -
Gabi704g00023 430 PANTHER OS01G0588500 PROTEIN-RELATED 78 380 - -
Gabi704g00023 430 CDD STKc_IRAK 103 379 - -
Gabi704g00023 430 Gene3D Transferase(Phosphotransferase) domain 1 183 393 - -
Gabi704g00023 430 Pfam Protein tyrosine and serine/threonine kinase 101 376 IPR001245 GO:0004672|GO:0006468
Gabi704g00023 430 SUPERFAMILY Protein kinase-like (PK-like) 79 383 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi704g00023 Gabi-Chr704 213745 217938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi704g00023 85 376 Glycoside Hydrolase AT3G07070 55.743 1.67e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi704g00023 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi704g00023 - - aprc:113848012 835.869