Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi69g00001 ATGGAACCTCTATGTGAGTTTTGTGGGGTTGTAAGAGCTGTGGTTTATTGCAAGGCAGATTCTGCACGTTTGTGCTTGGATTGTGATGCGTGTGTGCATGCTGCAAATGCTTTGTCTCGCAGGCATTCACGTTCTCTGCTGTGTGATAAATGCAATTCTCTGCCAGCAATTGTCCACTGCATGGATGATAAATTGTCTCTGTGTCAAGGTTGTGATTGGGACCAAAATGGTTGTTCAATGCAGGGACATAGGCGTCAGGCTTTGAATTGTTACACGGGTTGTCCCTCTTTTACTGAGTTTCCTAGGTTCATGTCCTTTGTGCTTGATGCACCTACTTCCTTAGGTGGTTCAGATCATGGTTGGGGATCACTTATTAATACTACATTGCCTGAAAATGACTGCTGCACTAGCAAGTGTTTGGAGCAACAAGATAACGATGGTTCCCTTGGTTTGGTGAGTGGCAAGTTGAATGAAATAGAATCATCTGTTGAATATGAACCTTGGATGGATCAATCTTCCATTATTCCACCAAATCCAAATTACCAGAACTTGCCAAAGCTGCAGGAATGTCCGAATTTCAATGATCTAGTAATCCATGATGGCGATGTTTTCAACATGGATAATGTTGAATTTAACTTTGAAAATAGTGCTGAAATATTTGACTCTTCTCAAATTGCCACAAGATACTCCCTTGATAATGGAGGAATGGACTGTCAATTAATGGAAAACAACATATCAGTTACAGAATCTAATGCTCTTATTGAGAGTGCCATGGAGGCTTCATTATCATCAGTTCAACAAGATTCTATGGCTTTTCAGTCTTCCAGAGCTGATAGCTCAACTATTGTGATGCAGGGAATCAACAGTAATCCAAATTATGCACTTATGCATCCTAGCTTCAATGAAAACATCAACCTAGGATTTCCTCAGGGCCAAGTTCATTCAAGCATGTCACTTTCACTAGCCAACATCACTGGTGAAAGTAGTACTACTGATTATCAAGATTGTGGATTATCACGAGTGTTTCTGACTGGTGAATCCTCGTGGGAACCAAATTTCGAGGTTTCATGCCCACAAGCCAGGGAGAAAGCTAAAATGAGATACAATGAGAAAAAGAAAACTAGAAGGTTCGGTAAGCAAATAAGATATGCTTCTCGCAAAGCAAGGGCTGATACAAGAAAACGTGTGAAAGGTAGATTTGTGAAAGCTGGTGAAGCATATGATTATGATCCTCAAGGAGCAAGGAACTTCTAA 1254 0.4067 MEPLCEFCGVVRAVVYCKADSARLCLDCDACVHAANALSRRHSRSLLCDKCNSLPAIVHCMDDKLSLCQGCDWDQNGCSMQGHRRQALNCYTGCPSFTEFPRFMSFVLDAPTSLGGSDHGWGSLINTTLPENDCCTSKCLEQQDNDGSLGLVSGKLNEIESSVEYEPWMDQSSIIPPNPNYQNLPKLQECPNFNDLVIHDGDVFNMDNVEFNFENSAEIFDSSQIATRYSLDNGGMDCQLMENNISVTESNALIESAMEASLSSVQQDSMAFQSSRADSSTIVMQGINSNPNYALMHPSFNENINLGFPQGQVHSSMSLSLANITGESSTTDYQDCGLSRVFLTGESSWEPNFEVSCPQAREKAKMRYNEKKKTRRFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPQGARNF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi69g00001 417 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 406 - -
Gabi69g00001 417 ProSiteProfiles CCT domain profile. 361 403 IPR010402 GO:0005515
Gabi69g00001 417 CDD Bbox1_BBX-like 4 47 - -
Gabi69g00001 417 Pfam CCT motif 361 403 IPR010402 GO:0005515
Gabi69g00001 417 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gabi69g00001 417 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi69g00001 Gabi-Chr69 7640 10838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi69g00001 1 411 C2C2-CO-like Transcription Factor Family AT3G21880 41.162 2.81e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Gabi69g00001 CCT 5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi69g00001 - - gmx:100804738 574.318