Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi698g00021 ATGTCGGAAGCAAAAGACCCGGCGATCAAGCTCTTCGGGAAGACGATCCCGGTCGGATCCGGAGACTCCGCCGGAGCTCCGGCTTCATCTTCTGGGGATGTTGTCGATGACAGTGTTGACCAGAATCACTCTTCTTCCACCAACTCTTCGAGGGAGTCACACACGAACAGGGATGCACAAGAGCAAGAGATTGACAAGGACACATTGGAGGAAAAACCATCTAATGATAAGAAGGAAGATGGAGCCCCCACCCAATCATTGGAAGAGTTCACCAATCCAGATACAGCCTCTAGGACTGATGAAGAATCTGTTACCCCATCCACTGAGAGGGAGGCTACTAAAGTGAAAACTTCAAAGGCTGAAGAAGAACAGGGTGAGATAGGCAATTCACAGGATAAGAACCTCAAAAAACCAGATAAAATACTGCCTTGTCCGCGTTGTAATAACATGGACACCAAATTCTGCTACTACAATAATTACAATGTCAACCAACCCCGCCACTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGTGGGACCATGAGGAATGTGCCTGTAGGTGCTGGTCGTAGGAAGAACAAGAACTCTGCTTCTCACTGTCACCACATAACTGTCTCTGAAGCAGTACTCCATAATACTCTGACAGACTTGACAAATGGAACTCATCATCCTTCGCTGAACTGCAATGGTGCAGTCCTTACATTTGGGTCTGATACACCCTTGTGTGAATCAATGGAATCTACTTTGAACCTTGCTGATAAAGCGGTGCACAATTACACAAAAAATGGATTTCATAAACATGAAGAACTAAGAATTTCTGTCCCCCATGCCAGTGGAGAAAAAAGAGATGATCAATCCAATAAATCTTCGGATACATCCACAAAATCAATTGAAGGTGCAAGCGCCAATAAGTCCCAAGAACAAACTATGCAGAATTGCCAGAGCTTCCCATCACAAGTTCCCTACTTTTCTGGGGCCACTTGGCCTTTCCCATGGAGTCCAGTGCAATGGAGCTCTCCTGTACCACCACCTGCCTTTTGCCCTCCAGGCTTTACCATGCCATTCTATCCTGCAACAGCTTATTGGGGTTGTACTGTGTCAGGCGCATGGAACATCCCATGGCTAGCACAACCATCATCACCAAATGGTGCAACCTCTAACTCTGGCTCTAACTCCCCAACCTTAGGTAAACATTCAAGGGAAGAGAACATGCTTAAATCAAATGATTCAAGCGGTGGAGATGGACATAGCAAAGAAAATAACAAAGAAAAGTGCCTGTGGTTTCCAAAAACTTTGAGAATTAATGACTCGGGAGAAGCTGCAGAAAGTTCTATATGGACAACTCTCGGGATTGCAAATGATAAGGCTGACTCAGTTCCCGGGGGAGGACTCTTTAAAGCATTCCCTTCAAAGTTTGATGAAAAGAATCACTCTATGCAAGCCTCACCAGTCTTGCAGGCCAATCCAGCAGCCTTGTCTAGGTCACTTAACTTTCGTGAGACCTCATAA 1512 0.457 MSEAKDPAIKLFGKTIPVGSGDSAGAPASSSGDVVDDSVDQNHSSSTNSSRESHTNRDAQEQEIDKDTLEEKPSNDKKEDGAPTQSLEEFTNPDTASRTDEESVTPSTEREATKVKTSKAEEEQGEIGNSQDKNLKKPDKILPCPRCNNMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHCHHITVSEAVLHNTLTDLTNGTHHPSLNCNGAVLTFGSDTPLCESMESTLNLADKAVHNYTKNGFHKHEELRISVPHASGEKRDDQSNKSSDTSTKSIEGASANKSQEQTMQNCQSFPSQVPYFSGATWPFPWSPVQWSSPVPPPAFCPPGFTMPFYPATAYWGCTVSGAWNIPWLAQPSSPNGATSNSGSNSPTLGKHSREENMLKSNDSSGGDGHSKENNKEKCLWFPKTLRINDSGEAAESSIWTTLGIANDKADSVPGGGLFKAFPSKFDEKNHSMQASPVLQANPAALSRSLNFRETS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi698g00021 503 MobiDBLite consensus disorder prediction 103 140 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 272 314 - -
Gabi698g00021 503 PANTHER CYCLIC DOF FACTOR 2 1 503 IPR045174 GO:0003700|GO:0006355
Gabi698g00021 503 ProSiteProfiles Zinc finger Dof-type profile. 142 196 IPR003851 GO:0003677|GO:0006355
Gabi698g00021 503 Pfam Dof domain, zinc finger 139 196 IPR003851 GO:0003677|GO:0006355
Gabi698g00021 503 MobiDBLite consensus disorder prediction 1 140 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 272 290 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 380 399 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 34 53 - -
Gabi698g00021 503 ProSitePatterns Zinc finger Dof-type signature. 144 180 IPR003851 GO:0003677|GO:0006355
Gabi698g00021 503 MobiDBLite consensus disorder prediction 400 423 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 380 423 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 291 314 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 54 84 - -
Gabi698g00021 503 MobiDBLite consensus disorder prediction 85 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi698g00021 Gabi-Chr698 135532 139729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi698g00021 6 503 C2C2-Dof Transcription Factor Family AT5G39660 43.353 1.21e-107 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi698g00021 zf-Dof 4.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi698g00021 - - gmx:100784308 787.719