Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi698g00003 ATGGAATCAATGGAGAACGTTTTCGGACCAAGAATGGAAGATCAGCAGCTTGACTTGCCACCTGGTTTTCAATTTCATCCAACAGATGAAGACCTCATAAATTGCTACCTCATGAAGAAGGTTGCTGACAGCAGCTTCTCTGCTCTAGCAATTGCTGAAGTTGATATGAACAAGTTTGAACCATGGGATTTGCCTGGGTTGGCTAAAATAGGTGAAACAGAATGGTACTTTTTCTGTGTAAGAGACCGAAATAGGGCCACTGAAGCTGGTTACTGGAAGGCCACAGGCAAAGACAAGGAGATAATCTCCGAAGAAGAACTGATTGGGATGAGGAAAACCTTGGTTTTCTATGAGGGAAGAGCTCCAAGAGGCGAAAAGACAAACTGGATCATGCATGAATACAGATTGAATGGGATATCTTCTGAATATTATGTAACCAAATCTGGACAGGGGGAATGGGTTATCTGCAAGGTCTTTGAGAAAACTCCTACTGGAAAGAATGCATGTTCCTAA 513 0.425 MESMENVFGPRMEDQQLDLPPGFQFHPTDEDLINCYLMKKVADSSFSALAIAEVDMNKFEPWDLPGLAKIGETEWYFFCVRDRNRATEAGYWKATGKDKEIISEEELIGMRKTLVFYEGRAPRGEKTNWIMHEYRLNGISSEYYVTKSGQGEWVICKVFEKTPTGKNACS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi698g00003 170 Gene3D NAC domain 28 164 IPR036093 GO:0003677|GO:0006355
Gabi698g00003 170 FunFam NAC domain-containing protein 100-like 28 165 - -
Gabi698g00003 170 ProSiteProfiles NAC domain profile. 19 161 IPR003441 GO:0003677|GO:0006355
Gabi698g00003 170 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 162 - -
Gabi698g00003 170 SUPERFAMILY NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Gabi698g00003 170 Pfam No apical meristem (NAM) protein 20 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi698g00003 Gabi-Chr698 24175 25167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi698g00003 17 166 NAC Transcription Factor Family AT5G07680 66.456 1.54e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi698g00003 NAM 9.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi698g00003 - - gmx:100782172 248.825