Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi698g00001 ATGGAATCAATGGAGAACGTTTTCAGACCAAGAAAGGAAGATCAACAGCTTGACTTGCCACCTGGTTTTCGATTTCATCCAACAGATGAAGAACTCATAAAGTGCTACCTCATCAAGAAGGTTGCTGACAACAGCTTCTGTGCTGTACCAATTGCTGAAGTTGATATGAACAAGTGTGAACCACAGGATTTACCTGGGTTGGCTAAAATGGGTGAAACAGAATGGTACTTTTTCTGTGTGAGAGACAGAAAATACCCAACTGGTCTAAGAACAAATAGGGCCACTGAAGGTGGTTACTGGAAGGCCACAGGCAAAGACAAGGAAATAGTCATTGAAGAAGAACTGATTGGGATGAGGAAAACCTTGGTTTTCTATAAGGGAAGAGCTCCAAGAGGTGAAAAGTCAAACTGGGTCATGCATGAATACAGATTGGATGGGATATATTCTCAATTTTATCTAACCAAATCTGGAAAGGGTGAATGGGCTATATGCAGAGTCTTTGAGAAGACTCCTAGTGGAAAGAAAATGCATGTTCCTCCAAATTTTGAGAGGTTCCAATTGCCTTCATTGATGGATTCTTCACCATACGACACTACTACTGGTGAATTGTCTCAGGTGACCTGCTTCTCCAATCCAAATCAAACTGTGGATCAGAACACACAAGATGAAATTGTTAGCATGGAAACTCCTATCTTGAACTTTTCATCTTCTTCAAGACCCTTTGATGTTTCCCCTTTTGCCAACCAACTCACACAGATTGCACAACCAATTGGAAATTCACAGTACCCGGGTTATTTTCTGCCTCAGGAACAGTCCATGCTGAGAATGCTGATGGAAAACAATGCATCAGTTGCTAATCAAAACCAGTTTTCTCAGGGAAGAGGCTTTGATGCTGATGATGTCTCCTCTTTGATATACAACAATGAGATGTTTCACAGGTTCTATGGGAATCAAGAACATTCATCCTCTTCTGCAGGGCCTGAGAACAATGATTCCCCATGGAATTACTGA 1011 0.4144 MESMENVFRPRKEDQQLDLPPGFRFHPTDEELIKCYLIKKVADNSFCAVPIAEVDMNKCEPQDLPGLAKMGETEWYFFCVRDRKYPTGLRTNRATEGGYWKATGKDKEIVIEEELIGMRKTLVFYKGRAPRGEKSNWVMHEYRLDGIYSQFYLTKSGKGEWAICRVFEKTPSGKKMHVPPNFERFQLPSLMDSSPYDTTTGELSQVTCFSNPNQTVDQNTQDEIVSMETPILNFSSSSRPFDVSPFANQLTQIAQPIGNSQYPGYFLPQEQSMLRMLMENNASVANQNQFSQGRGFDADDVSSLIYNNEMFHRFYGNQEHSSSSAGPENNDSPWNY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi698g00001 336 MobiDBLite consensus disorder prediction 317 336 - -
Gabi698g00001 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 259 - -
Gabi698g00001 336 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Gabi698g00001 336 Gene3D NAC domain 28 172 IPR036093 GO:0003677|GO:0006355
Gabi698g00001 336 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Gabi698g00001 336 FunFam NAC domain-containing protein 100-like 28 173 - -
Gabi698g00001 336 SUPERFAMILY NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi698g00001 Gabi-Chr698 11016 12275 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi698g00001 17 336 NAC Transcription Factor Family AT5G07680 50.893 2.71e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi698g00001 NAM 3.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi698g00001 - - gmx:100782172 464.151