Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi697g00011 ATGGCGAGAATAATCTCCAACGACGACGACGACAACAACAACAATGAAGCTTCAGAGGTTGATGATACTAACGCATCAAAAGATGAAGGTGAAGCTAGAGGTCGTATTAAAAAGGGGCCTTGGACGCCAGCAGAAGATACAATTTTGATAGAGTACGTGAAGAAATATGGTGAAGGGAATTGGAATTCTGTGCAGAAGAATTCTGGTTTATTAAGGTGTGGCAAAAGTTGCAGACTTAGATGGGCCAACCATCTAAGGCCTAATCTGAAAAAGGGTGCATTTTCTTCAGAAGAAGAACAAATCATCATTGATCTTCATGCTAAGCTTGGAAACAAATGGGCTAGAATGGCCGCACAGTTACCTGGGAGGACCGACAATGAAATAAAGAACTTTTGGAACACCAGAATGAAAAGGCGCCAGAGAGCAGGTTTACCACTTTACCCACCAGAAGTCCATGCAGAAGCCACTGCATATCACCTACAACAGCAGCATTACTTTGAACAACCTTTCTCTTCTTCATCTTCATCATTCTCTGTTCTCCTATCTTCATGCTACCCTAAGAAGCTCAATGAACCAACTCATTATTCTGCTGCAAATCCTCTACAGAATCACCCTGATTCTGCTAACTGTTTCACCAATCCATGTCCTCAATTCAAGTTTTCCAATGAAAACAGAGAAGACAGAAACCTTGCTTTGCCATCCTCCACTCTTTTCAACCAGAGTTTTGCTAGTGGAAGCTATAATCATGACTTCATAGCAGGATCTGATCCATATGAACCCCTTCCTTTAGTGCCAGGCTCAACTACTGAGATATCTTCAAGCCAAACAGCACCTGGCTCGGCCACCCCTGCTTCATCCTATGCTAGTGGTGTTGATGGCTTGATGGGAGCTTCAAGCATTGTTAATGATAACTATGAAGTTGCACCATTATCACCTCAAGGAAACAGTGGTCTGTTGGATGCTCTAGTAGTGGAGGCTCGAGGTCTTTCTCGCAATGACAAGTCCAAGAGTGAGTGTTCAAGGCCTTGTAAAAGAAAAAGTATGGCGCCTCAGGAACACACAGAGGAGGGAGGTATTGTGCCTGCTATGTCAGCCATGAAGCAGAACAGTGGTGACACCACTAATGAAACACAGAGGGATGATTTTAGTTCTTCTCTATTGTCAACAGGGAAGAAACTAGCTGGCGAGGATTCATTGGAAGAGATGAATTCCATGGACGATGACTTGTTTAGCCTACTCAATAATTTTCCCTCAGAAATGCCAATGCCTGAGTGGTACCGTAGAGGAGAAAGTCAGTCATTGGGACTTGAAACTCAACCCGATACTTCACCTGACCCCACAGATCAAGAATTTGCTTGGACTCTCGGAACTTGCTGGAACAACATGCCTGGCATATGTTAA 1401 0.4375 MARIISNDDDDNNNNEASEVDDTNASKDEGEARGRIKKGPWTPAEDTILIEYVKKYGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGAFSSEEEQIIIDLHAKLGNKWARMAAQLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEVHAEATAYHLQQQHYFEQPFSSSSSSFSVLLSSCYPKKLNEPTHYSAANPLQNHPDSANCFTNPCPQFKFSNENREDRNLALPSSTLFNQSFASGSYNHDFIAGSDPYEPLPLVPGSTTEISSSQTAPGSATPASSYASGVDGLMGASSIVNDNYEVAPLSPQGNSGLLDALVVEARGLSRNDKSKSECSRPCKRKSMAPQEHTEEGGIVPAMSAMKQNSGDTTNETQRDDFSSSLLSTGKKLAGEDSLEEMNSMDDDLFSLLNNFPSEMPMPEWYRRGESQSLGLETQPDTSPDPTDQEFAWTLGTCWNNMPGIC 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi697g00011 466 MobiDBLite consensus disorder prediction 266 287 - -
Gabi697g00011 466 Gene3D - 93 139 - -
Gabi697g00011 466 SMART sant 37 87 IPR001005 -
Gabi697g00011 466 SMART sant 90 138 IPR001005 -
Gabi697g00011 466 CDD SANT 40 85 IPR001005 -
Gabi697g00011 466 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Gabi697g00011 466 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Gabi697g00011 466 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 17 433 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 432 449 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 21 39 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 1 39 - -
Gabi697g00011 466 FunFam MYB-related transcription factor 37 90 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 330 387 - -
Gabi697g00011 466 Gene3D - 37 90 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 330 352 - -
Gabi697g00011 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Gabi697g00011 466 FunFam Transcription factor MYB97 93 168 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 262 287 - -
Gabi697g00011 466 CDD SANT 93 134 IPR001005 -
Gabi697g00011 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Gabi697g00011 466 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Gabi697g00011 466 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Gabi697g00011 466 SUPERFAMILY Homeodomain-like 35 132 IPR009057 -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 366 387 - -
Gabi697g00011 466 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi697g00011 Gabi-Chr697 118767 121246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi697g00011 32 466 MYB Transcription Factor Family AT2G32460 37.996 7.17e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi697g00011 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi697g00011 K09422 - gmx:100784779 611.683