Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi697g00003 ATGGAGTGGAACAGAGGCTTCATCATAGGACATGGCTCATCAGCCACCGTCTACCTCGCCACCTCTTCCTACTCCTCCGATGTCTCCGCCGTCAAGTCAGCTGAGCTATCATCACTATCACGGTTAGAACAACTACAGAGAGAACAGAGAATCTTGTCTTCTCTATCCTCTCCTTACATAGTTACCTATAAAGGTTGTGACATAACGAAGGAAAACAACAAGCTCTTTTACAACCTCTTCATGGAGTACATGCCCTCTGGCACGCTCTCTCAGGCAGCTCGCCGCCGGCTCAAGGAGCCGGTGATCGCACACTACACACGGCAAGTTTTGCAGGGGCTAGAATACTTGCATTCAAATGGTGTTGTGCATTGTGACATTAAGGGTAGCAATATATTGATTGGTGAAGATGGAGCCAAGATTGGTGACTTTGGATGTGCCAAGCGTGTGGCTGATACGGCGGCGGCGCCGATCAGCGGCACGCCGATGTTCATGGCACCGGAGGTGGCGCGTGGGGAAGAACAAGGGTACCCTTGTGATGTTTGGTCACTTGGGTGCACAGTGGTTGAAATGGCCACTGGTTTTGGACCGTGGCCTAATGTTGAAGACCCTGTTTCAGTGATGTACCGTGTTGCATATTCTGATGAGTTACCTGAGATTCCTGGTTTTCTGTCTGAGGAAGCAAAGGATTTCTTGGGGAAGTGTTTTAGGAGGAATCCAATGGAGAGGTTGACTGCTAGTCAACTGTTGAAGCATCCATTTCTTGGGGAATTCAATTTCAATGTTAAGCAAATTCAGGGTTCTAATTCAGGCTCACCAACAAGCATTCTTGAGCATGGCTTTTGGAATTCTGTGGAAGAGCCAGAATGGTTCAATGGCAATTTGGTTAAGATGAGTTCTGAGAATTCTCCTGCTGGTAGGATCAGAAGCCTTGCTGTGTGTTCAGGGGATCCCAATTGGACATGGGATGATGAGAATTGGATCACTACTAGAGACAATGAAATATCTTCAACTTGTAATAATGGGTTGGATTTGGATGAGTTGGAGAAAAGCAATATTAGAAGTAAAATTAGTTGTTGTTTTTGTGAGGATTACAAATGTAAGGATGTTAGTGTTGTAGTTAATAGTCTCAATTTTGAGAGAGGCATTACTGAGATGCTGCTAACTTCAACATTAGATTGTTTATAA 1185 0.4515 MEWNRGFIIGHGSSATVYLATSSYSSDVSAVKSAELSSLSRLEQLQREQRILSSLSSPYIVTYKGCDITKENNKLFYNLFMEYMPSGTLSQAARRRLKEPVIAHYTRQVLQGLEYLHSNGVVHCDIKGSNILIGEDGAKIGDFGCAKRVADTAAAPISGTPMFMAPEVARGEEQGYPCDVWSLGCTVVEMATGFGPWPNVEDPVSVMYRVAYSDELPEIPGFLSEEAKDFLGKCFRRNPMERLTASQLLKHPFLGEFNFNVKQIQGSNSGSPTSILEHGFWNSVEEPEWFNGNLVKMSSENSPAGRIRSLAVCSGDPNWTWDDENWITTRDNEISSTCNNGLDLDELEKSNIRSKISCCFCEDYKCKDVSVVVNSLNFERGITEMLLTSTLDCL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi697g00003 394 Pfam Protein kinase domain 8 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi697g00003 394 CDD STKc_MAPKKK 2 254 - -
Gabi697g00003 394 Gene3D Transferase(Phosphotransferase) domain 1 3 291 - -
Gabi697g00003 394 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Gabi697g00003 394 SUPERFAMILY Protein kinase-like (PK-like) 6 273 IPR011009 -
Gabi697g00003 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gabi697g00003 394 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
Gabi697g00003 394 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 335 - -
Gabi697g00003 394 SMART serkin_6 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi697g00003 394 ProSiteProfiles Protein kinase domain profile. 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi697g00003 Gabi-Chr697 30640 31824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi697g00003 1 284 MAP Kinase Kinase Kinase AT2G32510 54.608 4.50e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi697g00003 Pkinase 1.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi697g00003 K20716 - gmx:100797801 531.946