Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi697g00001 ATGGCCAGAGGGGGTGGACTCTCCATTGATTCAGATCCAATAAAGAGCTTCTTCCACCACAAGCCAATAGTTCTCAACTCTTTTCCTGAAGACAACAACAACAATAACACCAACCAACACAAGTGGAAACTTAGTCCTAACATGGATACCACAGTTAGAACCACATCCACTCCTAGCAGTAATTCCACCATCCCCTTTCAAGTCAACCATCCCTCTCCTCCACCCTCTGATGATGATGATAAGAGACCCCTCTTAGATGTCATGGACTTCTTCTCTGACAAGAACAACAAAGATGACAACCTTGCCTCTGCCTCTACCTCTGCACCTCCCCAACACCACTCACATGATCATTCCTCCACTCCTCCTGATATCTTAGAATTGAAAGTAAACACTGGTCTGAATCTTCTTACCACCAATACTAGCAGTGAGCAATCCATGGTGGATGATGAGATATCACCTAATTCAGAAGACAAAAGAGCTAAGAGTGAGCTGGTTGTTCTTCAAGCTGAACTTGAGCGGGTGAAGGTTGAGAATCATCGGCTGAGGAACATGCTTGATCAGGTTAATAGCAATTACAATGCCTTGCATAGGCATTTGGTGAATTTGATGCAGGACCAGAAGGTTGAGGAGGGTGAAGAACAACAGCAAGTGTTTGATGTAAAAGTAGAAGAGGAGAAACAAACTGGGAATGGTGGAGCTTTGGTTCCAAGGCAGTTTATGGATCTTGGATTGGCTACTAATGCTGACACTGATGAACCTTCGCTTTCTTCATCAGTTGGAAGAAGTAGGGATCGGTCTAAGTCACCTACAAATAACATAGAGGAAGGTTCAAAGGAAATTGGCACAAGAAAGAATGGGAATGCTAGTGATGAATTAGTTGTGTTTGATCAAAACAAGAAGGAGTTTGGTAGGGGAGTTGAAAGAGAGGATAGTCCCCCAGCAGATCAAGGTTTAGCTGCTAATAATGTTCCAAAATTTAGTCCTCCTAGAAATGTTGATCAAGCTGAAGCCACCATGAGGAAGGCAAGAGTTTCGGTTAGAGCTAGATCAGAGGCACCCCTGATCACTGATGGGTGTCAATGGAGAAAGTATGGGCAGAAAATGGCCAAAGGAAACCCATGTCCTCGAGCATATTACAGATGCACCATGGCCACCGGTTGCCCAGTGAGAAAACAAGTACAAAGGTGTGCTGAAGACCGAACAATACTTATCACAACATATGAAGGAAATCACAATCATCCTTTGCCTCCAGCGGCTATGGCAATGTCACAAACCACTTCCTCAGCTGCAAGAATGTTGCTTTCAGGATCAATGTCAAGCACTGATGGCCTAATGAATGCAAACTTCTTGGCAAGGACACTCCTTCCTTGTTCTTCAAGCATGGCAACTATCTCAGCATCAGCTCCATTCCCAACAGTTACATTGGACTTGACTCAATCTCCAAACCCATTACAGTTCCAAAAGCCTCCAAGCCAATTCCAAATCCCCTTCCCAGGTGTCCCTCAGAATTTTGACAATTCCACAGCCTCATTACTGCCTCAGATATTTGGTCAAGCACTGTACAATCAGTCAAAGTTTTCAGGGCTTCAAATGTCTCAAGATGCAGAACCTTCTTCCCAATTGGGTAATCAATCTCAACAGCCACCATTACACCTTGCTGACACAGTTAGTGCTGCCACTGCTGCCATTGCAGCTGACCCCAACTTCACTGCAGCTTTAGCAGCAGCTATCACTTCCATTATTGGAGGTTCACAGCCAAACAACAATAACAGTACCAATAATAATGGCAACACTACAACCAACAACAGCAATGGCAATGTTACATCAAGCAACAACAATAGCAATGGAAGCAATAAAATCAACAATTCGAATTTCTCAGGGAACTAG 1887 0.4393 MARGGGLSIDSDPIKSFFHHKPIVLNSFPEDNNNNNTNQHKWKLSPNMDTTVRTTSTPSSNSTIPFQVNHPSPPPSDDDDKRPLLDVMDFFSDKNNKDDNLASASTSAPPQHHSHDHSSTPPDILELKVNTGLNLLTTNTSSEQSMVDDEISPNSEDKRAKSELVVLQAELERVKVENHRLRNMLDQVNSNYNALHRHLVNLMQDQKVEEGEEQQQVFDVKVEEEKQTGNGGALVPRQFMDLGLATNADTDEPSLSSSVGRSRDRSKSPTNNIEEGSKEIGTRKNGNASDELVVFDQNKKEFGRGVEREDSPPADQGLAANNVPKFSPPRNVDQAEATMRKARVSVRARSEAPLITDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMSQTTSSAARMLLSGSMSSTDGLMNANFLARTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFQKPPSQFQIPFPGVPQNFDNSTASLLPQIFGQALYNQSKFSGLQMSQDAEPSSQLGNQSQQPPLHLADTVSAATAAIAADPNFTAALAAAITSIIGGSQPNNNNSTNNNGNTTTNNSNGNVTSSNNNSNGSNKINNSNFSGN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi697g00001 628 MobiDBLite consensus disorder prediction 26 124 - -
Gabi697g00001 628 Coils Coil 157 191 - -
Gabi697g00001 628 SUPERFAMILY WRKY DNA-binding domain 348 416 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi697g00001 628 MobiDBLite consensus disorder prediction 138 159 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 74 96 - -
Gabi697g00001 628 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 133 599 IPR044810 GO:0003700
Gabi697g00001 628 MobiDBLite consensus disorder prediction 529 549 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 97 115 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 303 331 - -
Gabi697g00001 628 FunFam probable WRKY transcription factor 31 340 417 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 267 285 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 582 628 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 249 266 - -
Gabi697g00001 628 Gene3D WRKY domain 340 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi697g00001 628 ProSiteProfiles WRKY domain profile. 350 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi697g00001 628 SMART WRKY_cls 355 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi697g00001 628 MobiDBLite consensus disorder prediction 246 291 - -
Gabi697g00001 628 MobiDBLite consensus disorder prediction 27 67 - -
Gabi697g00001 628 Pfam WRKY DNA -binding domain 357 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi697g00001 Gabi-Chr697 13527 16342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi697g00001 129 597 WRKY Transcription Factor Family AT1G62300 53.783 1.37e-134 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi697g00001 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi697g00001 - - gmx:100127384 785.023