Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi696g00008 ATGGCTGGCCCCAAATTAAAATCGAAAAGCCTTGTCTCTCTCTCTACGCTTCTGCTGTTGTTCTCTCTCCTCTCCACTGCCGTCGTCGTCGCCGACGATGGTGTGTTCATGTCGAAGCTGGAAAAAGCAATCAGCCCAAGAGGGTGGTCGGCGACCACCGCATTTTGCAGCTGGAACGGCGTGAAGTGTGACAGTTCAAACCGGGTGACCACTATCCATCTGGCTTCCGAGTTACTTACTGGAACACTCCCTTCCGATCTGAACTCACTCTCCCAACTCACAGACCTCTCTCTCCAGGGAAACTCTCTCTCCGGTTCGTTACCCTCCTTGGCGAACCTCACCATGCTCATAACAGTGTACCTCGACGGCAACAACTTCACCTCCATCCCTGACGGTTGCTTCCAAGGGCTAACCAGCTTGCAGAACCTAAGTTTAACCTACAACATCAACCTCGTACCCTGGACGTTTCCCGCCGAGTTGACTCAGTCAATTGACCTCGTCCAACTCGACCTCGGAAACTCAAACATCATGGGTTCCTTGCCCGATGTGTTCGATTCCTTTGTCAGTTTGCAGGGCCTTGATATCTCTTACAACAACTTCACTGGTAGTTTGCCCAAATCCTTCGCGGGATCTGGGATTAAGAATTTGTGGCTCAATAATCAGAGAAATGAGTTTGGCTTCTCGGGTTCAATTTACGTGCTTTCTTCCATGACCTCCTTGTCTCGGGTGTGGCTTATGGAGAACCAGTTCACGGGTCCAATTCCGGATTATTCAAATTGTACCAACTTGTTTGATCTTCAGCTTAAGGACAATTTGTTAACTGGTGTGGTTCCACCTTCTTTGATGGCTCTCTCTAGCTTAGGTTTCGTTTCTTTGGACAACAACATGCTGCAGGGTCCTGTTCCTGTGTTTGGGCAAGGTGTGGTCACTCTTGATGGGAACAATAGCTTTTGTCAATCAAATCCTGGTGTGCCTTGTGATCCCATTGCCACCACTTTGCTTGATGTTGCTGCAGATTTTGGGTATCCCCTTCAGTTGGCTAGTGCCTGGAAAGGGAACAAAACTTGTCAAGATTGGAGCTTCATTGTGTGTGAAGGAGGGAATATCACTACGGTGAATTTAGCAAAGCAGAATTTGACCGGAACCATTTCACCTGCATTTGCCAATTTAACGGATCTAAGGAACTTGTTTCTCAATGATAATAATTTGGTTGGTTCAATACCTTGGAGCTTGACAACTTTGCCTCAACTTGAGGTTCTGGATGTGTCTAATAACAACCTATCCGGAGAGGTTCCCAATTTCTCAGCTAAGGTGAAGTTCATTGCTGCAGGTAATGTTTTGCTTGGTCTTCCTGGAGATGGAGGCAATGGAACTAGTCCATCATCGGGTTCCGGTGATGCACCGAGTGGAAGTCCATCTAAAACAGCAAATGGTTCTTCCCTGTCCCCTGCTTGGATCGTAGGTATAGCCATTTTTGCTGTATTTTGTATTATTGGCGGAGTGGTAGCAGGATTGTTGATATGTATCACTATTTTTTGTTTAGTATGCAAGTCTACATCTTGGCGTGGAAAATTTTGGTTGACCACAAAAGGTAACAAAGATATTGAAGAATTCTTAAAAAATCACGGAGCCCCAACTCTCAAAAGATACAAATTCTCAAATATCAAGAAAATGACTGACTCTTTCAAAAATAAACTAGGACAAGGTGGTTTTGGTGCTGTATACAAAGGACAACTATTTAGTGGTTGTCCTGTGGCTGCAAAGATACTGAGGTCATCCAAAGGAAACAATGATGACTTCATCAATGAGGTTGCCAGTATTAGTAGAACTTCTCATGTCAATGTTGTCGCCCTTCTTGGATTTTGTTTGGAAGGCCGAAAGAAGGCTCTCATCTATGAGTTTATGTCCAATGGTTCCCTTGAAAAGTTCATTCACAGAAAGGGACATGAAACCATTGCATCTTTGAGCTGGGAGAAGTTGTATCAAATTGCCGTAGGGATTGCTCGAGGGCTGGAGTACTTGCATAGGGGATGCAATACTAGAATTTTGCATTTTGATATAAAACCACATAATATCCTTTTGGATGAGGATTTCTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCCAAGAAAGAGAGCATTATTTCCATGTCAGACGCTAGAGGGACAATTGGGTATGTAGCTCCAGAAATGTGGAATAGACATTTTGGAGGAGTTTCTCATAAGTCTGATGTTTATAGCTATGGAATGCTGCTGCTAGAAATGGTGGGAGCGACGAAGAACATTAATGCTGAAGCCAATCAGAGTAGTGAGATATACTTCCCACACTGGGTATATGACAGACTTGAGCAGGGCAGAGGTTTGAGACCAGATGAGGTGATGACAACAGAAGAAAATGAGATAACAAAAAGATTGACTGTAGTGGGTTTATGGTGCACTCAAACGTTTCCAAATGATAGACCTACAATTAGTAGAGTGATAGATATGTTGGAAGGCAACATGAATTCCCTGGAAATTCCACCAAGACCTACGCTTTCTTCTCCTACTAGACCAGCATCTGAATCATCCACTTCTTGA 2586 0.4428 MAGPKLKSKSLVSLSTLLLLFSLLSTAVVVADDGVFMSKLEKAISPRGWSATTAFCSWNGVKCDSSNRVTTIHLASELLTGTLPSDLNSLSQLTDLSLQGNSLSGSLPSLANLTMLITVYLDGNNFTSIPDGCFQGLTSLQNLSLTYNINLVPWTFPAELTQSIDLVQLDLGNSNIMGSLPDVFDSFVSLQGLDISYNNFTGSLPKSFAGSGIKNLWLNNQRNEFGFSGSIYVLSSMTSLSRVWLMENQFTGPIPDYSNCTNLFDLQLKDNLLTGVVPPSLMALSSLGFVSLDNNMLQGPVPVFGQGVVTLDGNNSFCQSNPGVPCDPIATTLLDVAADFGYPLQLASAWKGNKTCQDWSFIVCEGGNITTVNLAKQNLTGTISPAFANLTDLRNLFLNDNNLVGSIPWSLTTLPQLEVLDVSNNNLSGEVPNFSAKVKFIAAGNVLLGLPGDGGNGTSPSSGSGDAPSGSPSKTANGSSLSPAWIVGIAIFAVFCIIGGVVAGLLICITIFCLVCKSTSWRGKFWLTTKGNKDIEEFLKNHGAPTLKRYKFSNIKKMTDSFKNKLGQGGFGAVYKGQLFSGCPVAAKILRSSKGNNDDFINEVASISRTSHVNVVALLGFCLEGRKKALIYEFMSNGSLEKFIHRKGHETIASLSWEKLYQIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKLCPKKESIISMSDARGTIGYVAPEMWNRHFGGVSHKSDVYSYGMLLLEMVGATKNINAEANQSSEIYFPHWVYDRLEQGRGLRPDEVMTTEENEITKRLTVVGLWCTQTFPNDRPTISRVIDMLEGNMNSLEIPPRPTLSSPTRPASESSTS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi696g00008 861 Gene3D Phosphorylase Kinase; domain 1 533 634 - -
Gabi696g00008 861 SMART LRR_typ_2 113 136 IPR003591 -
Gabi696g00008 861 SMART LRR_typ_2 90 112 IPR003591 -
Gabi696g00008 861 SMART LRR_typ_2 187 210 IPR003591 -
Gabi696g00008 861 SMART LRR_typ_2 414 437 IPR003591 -
Gabi696g00008 861 ProSitePatterns Protein kinases ATP-binding region signature. 566 588 IPR017441 GO:0005524
Gabi696g00008 861 MobiDBLite consensus disorder prediction 456 475 - -
Gabi696g00008 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Gabi696g00008 861 SUPERFAMILY Protein kinase-like (PK-like) 545 834 IPR011009 -
Gabi696g00008 861 Gene3D Ribonuclease Inhibitor 329 449 IPR032675 -
Gabi696g00008 861 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Gabi696g00008 861 Pfam Protein tyrosine and serine/threonine kinase 562 832 IPR001245 GO:0004672|GO:0006468
Gabi696g00008 861 MobiDBLite consensus disorder prediction 838 861 - -
Gabi696g00008 861 FunFam Receptor-like kinase TMK4 31 323 - -
Gabi696g00008 861 Pfam Leucine rich repeat N-terminal domain 47 64 IPR013210 -
Gabi696g00008 861 ProSiteProfiles Protein kinase domain profile. 560 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi696g00008 861 FunFam PR5-like receptor kinase 635 845 - -
Gabi696g00008 861 PANTHER OSJNBA0070M12.3 PROTEIN 16 836 - -
Gabi696g00008 861 FunFam Leucine-rich repeat receptor-like kinase 328 450 - -
Gabi696g00008 861 MobiDBLite consensus disorder prediction 842 861 - -
Gabi696g00008 861 Gene3D Transferase(Phosphotransferase) domain 1 635 847 - -
Gabi696g00008 861 SMART serkin_6 560 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi696g00008 861 Gene3D Ribonuclease Inhibitor 35 323 IPR032675 -
Gabi696g00008 861 SUPERFAMILY L domain-like 46 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi696g00008 Gabi-Chr696 130330 133007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi696g00008 451 848 Receptor kinase-like Gene Family AT4G18250 50.485 3.18e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gabi696g00008 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi696g00008 K00924 - gmx:100781851 774.622