Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi696g00007 ATGGCTAAATCGAAATTCCTTGGTGGTATTCGGATACTGAAACGTCTCGCTACGCATTTTGCAACTGACGGCGTGAAGTGCGACACCTTCAACCGCGTGATTTCTATCAATCTGGCTTCCAAGTCACTTACCGGAAAACTCCCTTCCAATCTGAACGCACTCTCCCACCTAACTGACCTCTCTCTCCAGGGAAACTCTCTCTACGGTTCGTTACCCTCCTCGGCGAACCTTTCCTTGCTCCAAACAGTGTACCTCGACGGCAACAACTTCACCTCCATACGTGACGGTTGCTTCCAAGGGCTAACCAGCTTGCAGAACCTTAGCTTAACCAACAACATTAACCTCGAACCCTGGACCTTTCCCACCGAGTTGACTCAGTCAACCAACCTCTTCCAACTCCACCTCGGAAACTCAAACCTCGTGGGTCCCTTGCCGGATGTGTTCGATTCCTTTGTCAGTTTGCAGAGCATTCGTCTCTCTTACAACAAACTCACCGGTGGTTTGCCGAAGTCCTTTGCGGGATTGTCGATTAAGAGTTTGAGGCTCAAGAGTCAGAAAAACGAGTTTGGCCTCTCCGGTTCAATCGACGTGCTTTCTTCCATGACCTCATTGTCTCAGGTGTGGCTTAGCGAGAACCAGTTCACGGGTCCAATTCCGGATTTATCAAATTGTACCAACTTGTTTGATCTTCATCTTCAGGACAATTTGTTAACTGGTGTGGTTCCACCTTCTTTGATGGCTCTCTCTAGCTTACGGAACGTTTCTTTGTACAACAACATGCTGCAGGGTCCTGTTCCTGAGTTTGGGAAAGGTGTGAAGGTCTCTCTTGATGATGGGATCAATAGCTTTTGTCAATCAAGTCCTGGTGTGCCTTGTGATCCCACTGCCACCACTTTGCTTCATGTTGCTGCGGATTTTGGGTATCCCCTTCTGTTGGCTAGTGCCTGGAAAGGGAACAACACTTGTCAAGATTGGAGGTTCATTGTGTGTGAAGGAGGGAATATCACTACGGTGAATTTAGGAAAGAAGAATTTGACCGGAACCATTTCAGCTGCATTTGCCAATTTAACTTATTTAAGGAAATTGATTCTCAGTGATAATAATTTGGTTGGCTCAATACCTTGGAGCTTGACAACTTTGCCTCAACTTGAGATTCTGAATGTGTCTAATAACAACCTATCTGGAAAGGTTCCCAATTTCTCAGCTAAGGTGAAGTTCATTCTTGTAGGTAATGTTTTGCTTGATCGTCCAGGAGATGGGGGCAATGAAACTCGTCCATCATCGAGTTCTGGTGATGCACCGAGTGTAAGTCCATCTAAAACAGAACATGTGTTGATAGCAGGTATTATTGGTGGAGTGGTAACAGGATTGTTGATATGTATCACTGTTTATTTTTTGGTAAGCAAGTCCTCGTCTTGGCGTGGAAAATTTTGGTTGACCAAAAAAGATAACAAAGATATTGAAGCATTCTTGAAAAGTCATGGAGCTTTAACTCCGAAAAGATACAAATTCTCAGACATCAAGAAAATGACCAACTCGTTCAAAAATAAACTAGGACAAGGTGGTTTTGGTGCTGTATACAAAGGACATCTCTTTAGTGGTTGCCCTGTGGCTGTAAAGATATTGAGGTCAGCCAAAGGAAACAATGAAGACTTCATCAATGAGGTTGCCAGTATCAGTAGCACTTCTCATGTCAATGTTGTCACCCTTCTTGGATTTTGTCTGGAAGGTCGCAAGAAAGCTCTCATCTATGAGTTTATGTCCAATGGTTCCCTTGAAAACTTTATTCACAAAAAAGGACATGAAACTGTTGCATCATTGAGCTGGGAGAATTTGTATCAAATTGCCATAGGGATTGCTCGAGGGATGGAGTACTTGCATAGGGGGTGCAATACTAGAATTTTGCATTTTGACATAAAACCACATAATATTCTTTTAGATGCGGATTTTTGCCCTACGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCGAGAAAAGAGAGCATAATTTCCATGTCAGATGCTAGAGGGACAATTGGGTACGTAGCTCCAGAAATGTGGAATAGACATTTGGGAGGAGTTTCTCATAAATCTGATGTTTATAGCTACGGAATGATGCTGCTAGAGATGGTGGAAGGGAGGAAGAACATTAATGCTGAAGCCAGTGACACTAGTGAGATATACTTCCCACACTGGGTATACAATAGGCTTGAGCAGGGCATTGATTTGAGACCAGATGAGGTGATGACCACAGAAGAAAATGAGATAACAAAGAGATTGACCATAGTGGGTTTATGGTGCATTCAAACGTTTCCAAATGATAGACCTACAATGAGTAGAGTGATAGATATGTTGGAAGACAGCTTGAATTCCCTAGAAATTCCACCAAAACCTATGTTTTCTTCTCCTACTAGACGCGTATCTGAATCCTCCATTTCTTGA 2442 0.4324 MAKSKFLGGIRILKRLATHFATDGVKCDTFNRVISINLASKSLTGKLPSNLNALSHLTDLSLQGNSLYGSLPSSANLSLLQTVYLDGNNFTSIRDGCFQGLTSLQNLSLTNNINLEPWTFPTELTQSTNLFQLHLGNSNLVGPLPDVFDSFVSLQSIRLSYNKLTGGLPKSFAGLSIKSLRLKSQKNEFGLSGSIDVLSSMTSLSQVWLSENQFTGPIPDLSNCTNLFDLHLQDNLLTGVVPPSLMALSSLRNVSLYNNMLQGPVPEFGKGVKVSLDDGINSFCQSSPGVPCDPTATTLLHVAADFGYPLLLASAWKGNNTCQDWRFIVCEGGNITTVNLGKKNLTGTISAAFANLTYLRKLILSDNNLVGSIPWSLTTLPQLEILNVSNNNLSGKVPNFSAKVKFILVGNVLLDRPGDGGNETRPSSSSGDAPSVSPSKTEHVLIAGIIGGVVTGLLICITVYFLVSKSSSWRGKFWLTKKDNKDIEAFLKSHGALTPKRYKFSDIKKMTNSFKNKLGQGGFGAVYKGHLFSGCPVAVKILRSAKGNNEDFINEVASISSTSHVNVVTLLGFCLEGRKKALIYEFMSNGSLENFIHKKGHETVASLSWENLYQIAIGIARGMEYLHRGCNTRILHFDIKPHNILLDADFCPTISDFGLAKLCPRKESIISMSDARGTIGYVAPEMWNRHLGGVSHKSDVYSYGMMLLEMVEGRKNINAEASDTSEIYFPHWVYNRLEQGIDLRPDEVMTTEENEITKRLTIVGLWCIQTFPNDRPTMSRVIDMLEDSLNSLEIPPKPMFSSPTRRVSESSIS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi696g00007 813 CDD STKc_IRAK 518 786 - -
Gabi696g00007 813 Gene3D Phosphorylase Kinase; domain 1 476 586 - -
Gabi696g00007 813 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Gabi696g00007 813 SUPERFAMILY Protein kinase-like (PK-like) 495 785 IPR011009 -
Gabi696g00007 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Gabi696g00007 813 FunFam PR5-like receptor kinase 587 797 - -
Gabi696g00007 813 FunFam serine/threonine-protein kinase PBS1-like 480 586 - -
Gabi696g00007 813 FunFam Receptor-like kinase TMK4 17 289 - -
Gabi696g00007 813 SMART serkin_6 512 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi696g00007 813 Gene3D Ribonuclease Inhibitor 14 290 IPR032675 -
Gabi696g00007 813 Pfam Leucine rich repeat 80 140 IPR001611 GO:0005515
Gabi696g00007 813 Pfam Leucine rich repeat 334 393 IPR001611 GO:0005515
Gabi696g00007 813 Gene3D Ribonuclease Inhibitor 294 415 IPR032675 -
Gabi696g00007 813 FunFam Leucine-rich repeat receptor-like kinase 294 417 - -
Gabi696g00007 813 SMART LRR_typ_2 151 174 IPR003591 -
Gabi696g00007 813 SMART LRR_typ_2 77 100 IPR003591 -
Gabi696g00007 813 SMART LRR_typ_2 54 76 IPR003591 -
Gabi696g00007 813 SMART LRR_typ_2 380 403 IPR003591 -
Gabi696g00007 813 Pfam Protein tyrosine and serine/threonine kinase 514 785 IPR001245 GO:0004672|GO:0006468
Gabi696g00007 813 MobiDBLite consensus disorder prediction 422 437 - -
Gabi696g00007 813 SUPERFAMILY L domain-like 27 401 - -
Gabi696g00007 813 MobiDBLite consensus disorder prediction 417 438 - -
Gabi696g00007 813 PANTHER OSJNBA0070M12.3 PROTEIN 22 790 - -
Gabi696g00007 813 ProSiteProfiles Protein kinase domain profile. 512 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi696g00007 813 Gene3D Transferase(Phosphotransferase) domain 1 587 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi696g00007 Gabi-Chr696 91815 99216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi696g00007 449 800 Receptor kinase-like Gene Family AT4G18250 52.632 4.50e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gabi696g00007 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi696g00007 K00924 - csav:115712166 828.935