Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi693g00019 ATGAATAGAGGTGTTGTTCAAAGTTCACAGGTGCAACAAATGATGGCTGGAAACCCTAACTGGTGGAACATCAATATCAATAGCATGAGGCCCCCTCCTCCACAAGCTCCTCCTTTCTTGTCCACTCCTTCTAACTTTCTTACCCCTTATGCCCCCACTTCTTCTTCTTCTCCTCTTCCTTTTCCTTCTTGGCATGACAATATTCAAGAGCTTCCTGAATCATGGAGCCAGCTACTCATGGGTGGAATGGTGGCTGAAGAAGATAAGGTTGGTATGGGACAGTTTCAGACTAAGAAGTTAGAGAACTGGGAGGATCAAATGCTTGGTCAAGATCCAAATGCTTCTCTTGTTGATGTTAAACAAGAAAGCTCAGTTAATAGCTATGGAAATGAAGAACTTCAGCCATCAAAGCATGCTTGGTCTCCAAAATCATCTGTGACAAGTTTCAGCAGCAACATGTTAGATTTCTCTAACAATAACACGGATGCGAGGCATCCACCACCAGATCGATCTTCTGAGTGCAATAGCACTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCCTCTACAACTCAGTCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACAGCACTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTCTTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGAGCAGTGGATCAGGAAACACGAGGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGCTGCTGA 822 0.4489 MNRGVVQSSQVQQMMAGNPNWWNININSMRPPPPQAPPFLSTPSNFLTPYAPTSSSSPLPFPSWHDNIQELPESWSQLLMGGMVAEEDKVGMGQFQTKKLENWEDQMLGQDPNASLVDVKQESSVNSYGNEELQPSKHAWSPKSSVTSFSSNMLDFSNNNTDARHPPPDRSSECNSTAAGGALKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEALGYIRFLQSQIEALSLPYLSSGSGNTRFKERRIVYSLKTPVSC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi693g00019 273 MobiDBLite consensus disorder prediction 119 178 - -
Gabi693g00019 273 Gene3D - 194 247 IPR036638 GO:0046983
Gabi693g00019 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 188 237 IPR011598 GO:0046983
Gabi693g00019 273 FunFam transcription factor bHLH68 isoform X1 195 248 - -
Gabi693g00019 273 MobiDBLite consensus disorder prediction 119 196 - -
Gabi693g00019 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 249 IPR036638 GO:0046983
Gabi693g00019 273 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 253 - -
Gabi693g00019 273 CDD bHLH_AtbHLH_like 196 245 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi693g00019 Gabi-Chr693 156240 161728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi693g00019 1 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.311 1.03e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi693g00019 - - gmx:100786555 400.593