Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi687g00006 ATGGCCGATGACTTTGAATTCGCCGATAAAGTCCCTCCTTCATTCGATCGCGTGGGCAATGTGATTAAGGATTCTGCTTCAAAAGGGTTCAACCCAGGATTAATTGTTCTCCTGGTTATTGTTGGGTTGCTGTTGGTATTCCTCGTTGGAAATTATGTACTCTACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAATCTCAAAGAAGAAGATGAAAAAGGATAGACTGAAGCAAGGCATCTCTGCACCTGGAGAGTAG 270 0.437 MADDFEFADKVPPSFDRVGNVIKDSASKGFNPGLIVLLVIVGLLLVFLVGNYVLYTYAQKTLPPRKKKPISKKKMKKDRLKQGISAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi687g00006 89 MobiDBLite consensus disorder prediction 63 89 - -
Gabi687g00006 89 PANTHER DNA-BINDING PROTEIN S1FA2 1 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gabi687g00006 89 MobiDBLite consensus disorder prediction 65 79 - -
Gabi687g00006 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi687g00006 Gabi-Chr687 116266 118843 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gabi687g00006 S1FA 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi687g00006 - - gmx:100499820 138.658