Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi687g00001 ATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGGACAAGAAAGACCAGAAATCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGACTCACACTTGGAAACTGATAAAACACCTCCTCTTCCTCCACCTGAGGAGATTATTGTAACTCATGTTGAGAATGAAAACAGTCATGATCATGTTGAAGTTGCAACTGCAGTGGATGTTGAGGAACCTGTTCCTGCTGTTCAGACAGAAGCTGCTGCTGAGGTTCAAGCCACTACAATTGTTCAGTTTGCCAGTAAACCAAACGATCAAGTGGCAGCAACCAAGATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGAAGGCTTTAAGGGGGTTGGTCAGGTTGAAGTCGTTGATGGAAGGACCAGTGGTAAAACGTCAAGCCATTAGTACCCTACGCTCTATGCAGACTTTAGCTCATGTGCAATCTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGATAATCAAGCTCTTCAAAAACAGCTCTTGCAGAAGCACACAAAAGAGCTAGAGAGCATGCGGATTGGGGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATTGAAGCCAAGTTACTAAGCAAGTATGAGGCTACTGTGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCACCAGCAAAACTCGAAGAATCCATCGAGATCGATGAATCCAATGTTCATGGATCCAACCAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATGGGAGAGCCCTAACATGATGGAGAAAGAGAAGAATGACCATTCATCTGTAAAAAGTTCAGGCCGCGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTTCAACTCAATTCTGAAAAGCATTCTCCAACAGCCAGCCAAAATCCAGGCTCACCTAACTTTCAGTCTCATTCAAATCCTCCCAAGCCAGCAGCTTCAGCTTCTGCAACAGTTTCTAAGAAATTGAAGAAGGGTAGCCCAAAGGACAGCTTGGTTATGGATGATGACACCAAAAGCATGGTAAGCGTGCAATCAGACCGGCTGCGGAGGCACTCCATTGCTGGATCAACTGTGGGAGATGATGAAAGCCTAGCAAACTCTCCAGCACTTCCAAGTTATATGGTGCCAACTAAATCTGCAAAAGCTAAGTCCAAGATGCAAAGTCCATTAGCCTCAGAGAATAAGACCCCAGAAAAGGGGTCCTTTGGGAGTGCAAAGAAAAGGCTCTCTTTCCCAGCTTCCCCTGCCAGACCAAGACGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTAAATGCTGAAATCACTGTGGGCAATGGTGTGGTTGGTTGA 1425 0.4575 MGRKGNWFSSVKKALSPESKDKKDQKSSGSKKKWFGKQKLQTSDSHLETDKTPPLPPPEEIIVTHVENENSHDHVEVATAVDVEEPVPAVQTEAAAEVQATTIVQFASKPNDQVAATKIQTAFRGYLARRALKALRGLVRLKSLMEGPVVKRQAISTLRSMQTLAHVQSQIRSRRLRMLEDNQALQKQLLQKHTKELESMRIGEEWDDSLQSKEQIEAKLLSKYEATVRRERAMAYSFSHQQNSKNPSRSMNPMFMDPTNPAWGWSWLERWMAARPWESPNMMEKEKNDHSSVKSSGRGITSAEISKSFARFQLNSEKHSPTASQNPGSPNFQSHSNPPKPAASASATVSKKLKKGSPKDSLVMDDDTKSMVSVQSDRLRRHSIAGSTVGDDESLANSPALPSYMVPTKSAKAKSKMQSPLASENKTPEKGSFGSAKKRLSFPASPARPRRHSGPPKVESSLNAEITVGNGVVG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi687g00001 474 SMART iq_5 111 133 IPR000048 GO:0005515
Gabi687g00001 474 MobiDBLite consensus disorder prediction 412 430 - -
Gabi687g00001 474 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gabi687g00001 474 MobiDBLite consensus disorder prediction 315 474 - -
Gabi687g00001 474 MobiDBLite consensus disorder prediction 1 59 - -
Gabi687g00001 474 MobiDBLite consensus disorder prediction 15 46 - -
Gabi687g00001 474 PANTHER IQ-DOMAIN 5-RELATED 1 455 - -
Gabi687g00001 474 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Gabi687g00001 474 Gene3D - 64 139 - -
Gabi687g00001 474 MobiDBLite consensus disorder prediction 353 376 - -
Gabi687g00001 474 MobiDBLite consensus disorder prediction 315 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi687g00001 Gabi-Chr687 4550 9260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi687g00001 1 472 IQD Protein Family AT5G03040 52.697 2.86e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi687g00001 - - gmx:100799058 701.434