Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi685g00007 ATGTTCTCTCTTGAAGAGAAATACGTACTAACACTCGAAGCTTGGATTGGATGGCTTTGCGCGAGATACGTATTCATGGAAAGAATTCTTGAACGGTATGAGAGATATTCGTATGCGGAGAGGCAGCTTGTTGCAAATGATCAGCAACCAAATGAAAATTGGACTCTAGAACACGCAAAGCTCAAAGCAAGGTTGGAAGTCCTACAGAGAAATCAAAGGAATTTTATGGGAGAAGAACTGGATGGCCTAAGTATAAAAGAGCTTCAAAATTTGGAACATCAGCTTGATTCTGCTCTCAAACACATTAGATCACGAAAGAACCAACTCATGTATGAATCTATTTCAGAGCTTCATAAAAAGGATAAGGCCCTCCAAGAACAAAACACCTTGCTTGCTAAGAAGATAAAGGAGAAAGAGAAGGCACTGACCCAACAGGCCCAACTGGAGCAGCAAACTGATGATATGGATCTAGCCTCTTCTGCCGTCGTACCTCAATCATTGCAAACCTTGAATATTGGTGGTTCCTTGCAAGGGAGAGGTGATGGGGAAGATAATGAAGGAACCCCAACGCGAACCCAAGCTACTGCCCTTCTTCCACCTTGGATGCTTCGTCCCATAAATGAATAG 627 0.429 MFSLEEKYVLTLEAWIGWLCARYVFMERILERYERYSYAERQLVANDQQPNENWTLEHAKLKARLEVLQRNQRNFMGEELDGLSIKELQNLEHQLDSALKHIRSRKNQLMYESISELHKKDKALQEQNTLLAKKIKEKEKALTQQAQLEQQTDDMDLASSAVVPQSLQTLNIGGSLQGRGDGEDNEGTPTRTQATALLPPWMLRPINE 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi685g00007 208 MobiDBLite consensus disorder prediction 171 196 - -
Gabi685g00007 208 Coils Coil 88 108 - -
Gabi685g00007 208 Coils Coil 131 151 - -
Gabi685g00007 208 Pfam K-box region 47 135 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gabi685g00007 208 ProSiteProfiles K-box domain profile. 51 141 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gabi685g00007 208 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi685g00007 Gabi-Chr685 153536 163638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi685g00007 26 205 MADS-box Gene Family AT5G60910 59.116 4.16e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi685g00007 K09264 - gmx:100784742 278.87