Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi683g00001 ATGCCGTTCATCAAATTCATAAAACATCATAGTACCGAGAAATCCAAAAACACTAGGCTCCCTCCTGGTCCTACGCCATGGCCTATAGTTGGAAATCTTCCTGAAATGCTTGCAAACAAGCCTACATTCAGATGGATACAAAAGCTGATGAATGATCTAGACACTGAAATAGCTTGCATCCGTCTAGGTAATGTTCATGTAATCCCTGTCACAAGCCCTGAAATTGCACGTGAGTTCTTGATCAAACATGATGCTGTTTTTGCTTCGAGACCCTTGAACTGGTCCAGTGAGCATGTCTCAAGTGGATATTTGACAACAGCTCTTGTACCCTTTGGAGAACAATGGAAGAAAATGAAGAAAGTGCTTCGCAATGATTTGCTTTCACCTCTCAGGCATCAATGGCTTCATGACAAAAGGATGGAAGAAGCTGATAACCTTGTTCGTTATATCTACAACCAATGCAAAAATGGTGGCCTTGTGAATGTGAGGGTCGCTGCACAGAGTTATTCTGGGAACGTGATTAGGAGGTTGGTTTTCAATAAAAGGTACTTTGGAAAAGGTAAGGAAGATGGAGGACCAGGCTTTGAGGAAATGGAGCATGTTCAAGCACTTTTTATTGTGTTAAAGTACATCTTCGCTTTTTCTGTTTCTGATTACCTGCCATGTTTGAGAGGACTTGACTTGGATGGTCATGAGAAAATCATGAAAAATGCTGTTATGATCCTAAAGAAATATCATGATTCTATCATCGAGGAAAGAATTCAGCAATGGAAGAAAGGGGAAAAGAAAGATGAAGACGACTTGCTTGATGTTCTCATCTCACTAAAAGATGCAGATAACAATGCACTGTTGACTGAGGAGGAAATTAAATCTCAAATTATGGAAATGATGATTGCAACCGTGGATAACCCATCAAATGCAGTTGAATGGGGACTTGCTGAAATGATAAATCAACCTGAGCTACTTCAAAAGGCTACCGAAGAATTGGACAATGTGGTTGGTAAGGGAAGGTTGGTGCAAGAATCAGATATTCCAAAGCTCAACTATGTGAAGGCTTGTGCAAAAGAAGCTTTTCGCATTCATCCCATTTTGGATTTTAACGTTCCCCATGTTTCCATGGGTGACATAGTTGTTGCTAATTACTTTATCCCAAAGGGTAGCCATGTGTTGTTAAGGAGACAAGGACTTGGTCAAAATCCAAGAATTTGGAAAGAACCCCTTAAGTTCAAACCAGAACGTCATCTTAAGAGTGATGGGTCTAATTTGGTTTTAACAGATCCAAGGTTGGAGATGTTGTCATTTAGTGCTGGAAGGCGTAGCTGTCCAGGATTCGTGCTTGGAACTGCAATGACTGTTATGCTATTTGCAAGGTTATTGCATTGCTTTACTTGGAATGTGTCACCTAATAAGTCTAGCATTGACCTCTCTGAATCTGAAGAAGATACCAAGAAAGCTAAGCCCCTTGTGGCATTTGCAAAGCCAAGGTTTCCATTAGAAGTTTATGGTACATATTAA 1515 0.4033 MPFIKFIKHHSTEKSKNTRLPPGPTPWPIVGNLPEMLANKPTFRWIQKLMNDLDTEIACIRLGNVHVIPVTSPEIAREFLIKHDAVFASRPLNWSSEHVSSGYLTTALVPFGEQWKKMKKVLRNDLLSPLRHQWLHDKRMEEADNLVRYIYNQCKNGGLVNVRVAAQSYSGNVIRRLVFNKRYFGKGKEDGGPGFEEMEHVQALFIVLKYIFAFSVSDYLPCLRGLDLDGHEKIMKNAVMILKKYHDSIIEERIQQWKKGEKKDEDDLLDVLISLKDADNNALLTEEEIKSQIMEMMIATVDNPSNAVEWGLAEMINQPELLQKATEELDNVVGKGRLVQESDIPKLNYVKACAKEAFRIHPILDFNVPHVSMGDIVVANYFIPKGSHVLLRRQGLGQNPRIWKEPLKFKPERHLKSDGSNLVLTDPRLEMLSFSAGRRSCPGFVLGTAMTVMLFARLLHCFTWNVSPNKSSIDLSESEEDTKKAKPLVAFAKPRFPLEVYGTY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi683g00001 504 SUPERFAMILY Cytochrome P450 21 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 10 501 - -
Gabi683g00001 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gabi683g00001 504 FunFam Cytochrome P450 9 13 499 - -
Gabi683g00001 504 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 75 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 Pfam Cytochrome P450 21 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi683g00001 504 Gene3D Cytochrome P450 5 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi683g00001 Gabi-Chr683 39546 42599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi683g00001 15 503 Cytochrome P450 AT5G05260 56.653 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi683g00001 - K13027 gmx:100809902 691.034