Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi681g00001 ATGCAAACACATCTCACACTCACATTCTCTACTCTCTTCCTCACCCTCTTGTTCACATCTCCAACCTTTCTCTTAGCGCACGATCACGATGAGCCGCAAGATCTGGTCCGTTCATCGTGCGTCCACGCCAGGTACCCGAGGCTGTGCATCCGAACACTCTCCAACTACGCGGGGCCCACCAACACTTCATTGGACGTGGCACGGGCCGCGCTTAGGGTGAGCCTGGCCCACGCTCTTAGGGCCTCCAAGTACCTGAAGTCATATTCCGGGCCCAAAAGCACCGCTGACATAATAACAAAAAGACAGCGAGTGGCGCTGAGTGACTGTGCCGAACAGATTTCGGACTCGGTGGATGAGTTAAGGAAGAGCCTGGAGGAACTGCAGCACCTTCGACCGGAGACTTTCCGGTGGCAGATGAGCAACGCCCAGACTTGGGTCAGCGCCGCCCTCACCGACGGCGATACCTGCCTCGATGGCTTCTCCGGCGAAGGAAAGGTGAGGCGGGACTTGAAGCGCAGAGTCACTGACGTGGCAAGGGTCACGAGCAATGCTCTGTATATGATCAATCGTCTCTGTGAAGGTGGGTCCGGGAAGGTTAAGCCCTCAAGCTCGAATTCCAAGAACTGA 627 0.563 MQTHLTLTFSTLFLTLLFTSPTFLLAHDHDEPQDLVRSSCVHARYPRLCIRTLSNYAGPTNTSLDVARAALRVSLAHALRASKYLKSYSGPKSTADIITKRQRVALSDCAEQISDSVDELRKSLEELQHLRPETFRWQMSNAQTWVSAALTDGDTCLDGFSGEGKVRRDLKRRVTDVARVTSNALYMINRLCEGGSGKVKPSSSNSKN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi681g00001 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 186 - -
Gabi681g00001 208 Pfam Plant invertase/pectin methylesterase inhibitor 34 186 IPR006501 GO:0004857
Gabi681g00001 208 NCBIfam pectinesterase inhibitor domain 4 191 IPR006501 GO:0004857
Gabi681g00001 208 CDD PMEI-like_3 38 191 - -
Gabi681g00001 208 Coils Coil 110 130 - -
Gabi681g00001 208 SMART PMEI_2 31 187 IPR006501 GO:0004857
Gabi681g00001 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 191 IPR035513 -
Gabi681g00001 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 192 IPR035513 -
Gabi681g00001 208 FunFam Pectinesterase inhibitor 3 31 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi681g00001 Gabi-Chr681 9740 10497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi681g00001 35 193 Carbohydrate Esterase AT3G14310 34.320 1.41e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi681g00001 - - gmx:100816686 248.825