Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi679g00010 ATGCATCATCTACTTCGGATTTTCGGACATAGCAAGCAAACCACCACCATGGATGCTAAGAAGCTCCGAAGAAAACCCAAACTCGAGCGCCGCAATGCACACAAGCACTTCGAGTACGACGCCGTATCGTCTTCCTCCTCGCTCGACGACTCCTCCTCCTCCTCCGGCTCGCTCTACACTCGATCCATGGAGTTCTACCACCGCACCAGCTTCCGAATTGAGGGAGTCGAGGGTGAGTTCGATCGAATTTGCAGGAGTTTGGGGCTCTCGGGGCCAGAAGACTTCGCTATTCCCGCGGCAGCATGGGAGGCCATGAAGGTTCGATCCTCTTCCGATATTCTTCCAAGGTTGAAACTCACCGAGCTGGATAGTCAGGAGAAGGAAGAACCAAAGGTAAAAGAGGAAAGTAACGTAGCAGAGGGTTGTGATTTGGGTGAGAAATTTGAAGAGAGGGTTAGGGTTAGGGTTAGGGTTAGAGACGAGACTGCTGAGACTACCGTGTGTTGCACGGAAAGTGGCGGCGGCGGCGGCGGTATAAAGGGGGTTCGTCCCCCGATGCTTAAGCCGCCACCAGGGGTGAGGGTTCAGGTTGTTGATAACGAGTGCTCCACTTGGGACCTTTTGAGGGATTTTGCTCCGCAAGGTGAAGGGGATGTACCGAGAGAAGCAGCGGAGAAAGAAGAAGGGGAAGTTGGTGGGGTGAGTCCGAAGAGAGAAGACGAAGAGAGAGTGGATAATGCTGCAAGGATAGCGGAAATTGTTGCTGAGCTTTCAGGATCGTGTTCGTTTACTACGTCAAATGAAGATGATTCTTCTAGCACTGCCACGGATCCTAGGTCTAATAATATATCTCCTAACGGGAGAATCAGACGTATTATTACCCCCGGCAGATGGCAAAAGGGTGGCCTTTTGGGGCGCGGCTCGTTTGGCTCAGTCTATGAAGGGATTTCTGACGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAATCAGGGAAAGCAAAGTGTCTATCAACTGGACCAGGAAATTGCACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACCATGGCACAGAAATGGATGAGTCAACGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGCTCCCTTGGAAGCCTCTATCGGAGGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGGAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTTCATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCTACCAAACTGAATGATGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCCCCTGAGGTTGTAAAAGGAAAGAACAAAGGTTATGGGCTTCCGGCAGATATATGGAGTCTGGGATGCACTGTGCTGGAGATGTTATCGGGCAAAATTCCATACTCTCAATTGGAATGTATGCAGGCATTATTTAGAATTGGAAAAGGTGAACGACCTCCTATTCCTGATTCTCTTTCAAAAGATGCACGGGATTTAATCCTGCAGTGCCTTCAAGTTAATCCAGATGATCGTCCCACTGCTGCCGAACTCTTAAATCACCCATTTATCCAAAGGCCGATTTCCCAGTCATCTGGTTCTTCACTTCCTCACGTTCCTGGCAGAAAGGGTTAA 1716 0.4784 MHHLLRIFGHSKQTTTMDAKKLRRKPKLERRNAHKHFEYDAVSSSSSLDDSSSSSGSLYTRSMEFYHRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLTELDSQEKEEPKVKEESNVAEGCDLGEKFEERVRVRVRVRDETAETTVCCTESGGGGGGIKGVRPPMLKPPPGVRVQVVDNECSTWDLLRDFAPQGEGDVPREAAEKEEGEVGGVSPKREDEERVDNAARIAEIVAELSGSCSFTTSNEDDSSSTATDPRSNNISPNGRIRRIITPGRWQKGGLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGNQGKQSVYQLDQEIALLSQFEHENIVQYHGTEMDESTLYIFLELVTKGSLGSLYRRYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVHASGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNKGYGLPADIWSLGCTVLEMLSGKIPYSQLECMQALFRIGKGERPPIPDSLSKDARDLILQCLQVNPDDRPTAAELLNHPFIQRPISQSSGSSLPHVPGRKG 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi679g00010 571 SMART serkin_6 298 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi679g00010 571 MobiDBLite consensus disorder prediction 15 36 - -
Gabi679g00010 571 MobiDBLite consensus disorder prediction 211 244 - -
Gabi679g00010 571 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 41 559 - -
Gabi679g00010 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Gabi679g00010 571 MobiDBLite consensus disorder prediction 261 288 - -
Gabi679g00010 571 SUPERFAMILY Protein kinase-like (PK-like) 286 556 IPR011009 -
Gabi679g00010 571 Pfam Protein kinase domain 299 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi679g00010 571 Gene3D Transferase(Phosphotransferase) domain 1 297 565 - -
Gabi679g00010 571 MobiDBLite consensus disorder prediction 215 244 - -
Gabi679g00010 571 MobiDBLite consensus disorder prediction 168 191 - -
Gabi679g00010 571 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Gabi679g00010 571 ProSiteProfiles Protein kinase domain profile. 298 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi679g00010 571 FunFam Mitogen-activated protein kinase 1, putative, expressed 296 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi679g00010 Gabi-Chr679 148700 157638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi679g00010 6 555 MAP Kinase Kinase Kinase AT4G08500 51.846 1.47e-177 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi679g00010 Pkinase 3.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi679g00010 K13414 - gmx:100819999 825.083